PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4jz5A_

Fold library id	PDB Header	Molecule	Title
c4jz5A_	PDB header: hydrolase	Chain: A: PDB Molecule: gp26;	PDBTitle: high-resolution structure of catalytic domain of endolysin ply40 from2 bacteriophage p40 of listeria monocytogenes

Links to external resources
Added to library: Sat Apr 12 08:23:44 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G S H M M V L V L D I S K W Q P T V N Y S G L K E D V G F V V I R S S N G T Q K Y D E R L E Q H A K G L D K V G M P F G L Y H Y A L F E G G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T S
B
G G G G T T T
T T T
T T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q D T I N E A N M L V S A Y K K C R Q L G A E P T F L F L D Y E E V K L K S G N V V N E C Q R F I D H V K G Q T G V K V G L Y A G D S F W K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . .

Sequence T H D L D K V K H D L R W V A R Y G V D N G K P S T K P S I P Y D L W Q Y T S K G R I K A I A S P V D M N T C S S D I L N K L K G S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T G G G S
S
T T
S S S
S
S S
S T T
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	S	H	M	M	V	L	V	L	D	I	S	K	W	Q	P	T	V	N	Y	S	G	L	K	E	D	V	G	F	V	V	I	R	S	S	N	G	T	Q	K	Y	D	E	R	L	E	Q	H	A	K	G	L	D	K	V	G	M	P	F	G	L	Y	H	Y	A	L	F	E	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S									T	T	S			B		G	G	G	G	T	T	T											T	T	T				T	T												T													S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	D	T	I	N	E	A	N	M	L	V	S	A	Y	K	K	C	R	Q	L	G	A	E	P	T	F	L	F	L	D	Y	E	E	V	K	L	K	S	G	N	V	V	N	E	C	Q	R	F	I	D	H	V	K	G	Q	T	G	V	K	V	G	L	Y	A	G	D	S	F	W	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T												S				S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Sequence	T	H	D	L	D	K	V	K	H	D	L	R	W	V	A	R	Y	G	V	D	N	G	K	P	S	T	K	P	S	I	P	Y	D	L	W	Q	Y	T	S	K	G	R	I	K	A	I	A	S	P	V	D	M	N	T	C	S	S	D	I	L	N	K	L	K	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	G	G	G	S			S								T	T		S	S	S			S			S	S			S											T	T																			T	T