PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4jwtA_

Fold library id	PDB Header	Molecule	Title
c4jwtA_	PDB header: hydrolase	Chain: A: PDB Molecule: methylthioadenosine nucleosidase;	PDBTitle: crystal structure of a putative 5'-methylthioadenosine/s-2 adenosylhomocysteine nucleosidase from sulfurimonas denitrificans dsm3 1251 (target nysgrc-029304 )

Links to external resources
Added to library: Sat May 11 08:28:16 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G V D L G T E N L Y F Q S X K I A I X G A X P E E I S P I L E K I G S Y K S T S Y A G N K Y Y E A T Y Q G V E L V I A Y S K I G K V F S A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G T
S
S S
T T T T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S A A T X I E H F G A T K L L F S G V A G A I S T N L K V G D L I V A T K L S Q H D L D I T A F G H P Y G Y V P E G S V F V E A D K D X I E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S T T
T T
T T
G G G T
T T
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L S K K V A L E X G K S V Q E G I I A T G D Q F V A N E E R K N W I G T T F G A D A L E X E G G S V G V V C N A L N I P F F I L R S I S D A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
S S S T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . .

Sequence A D X D A S F S F D E F L E S S A K E S A E F I X K X V D E L V A L P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	V	D	L	G	T	E	N	L	Y	F	Q	S	X	K	I	A	I	X	G	A	X	P	E	E	I	S	P	I	L	E	K	I	G	S	Y	K	S	T	S	Y	A	G	N	K	Y	Y	E	A	T	Y	Q	G	V	E	L	V	I	A	Y	S	K	I	G	K	V	F	S	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S		G	G	G	T			S								S	S																				T	T									T	T										S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	A	A	T	X	I	E	H	F	G	A	T	K	L	L	F	S	G	V	A	G	A	I	S	T	N	L	K	V	G	D	L	I	V	A	T	K	L	S	Q	H	D	L	D	I	T	A	F	G	H	P	Y	G	Y	V	P	E	G	S	V	F	V	E	A	D	K	D	X	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T			S												S	T	T			T	T											T	T				G	G	G	T			T	T			T	T			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	S	K	K	V	A	L	E	X	G	K	S	V	Q	E	G	I	I	A	T	G	D	Q	F	V	A	N	E	E	R	K	N	W	I	G	T	T	F	G	A	D	A	L	E	X	E	G	G	S	V	G	V	V	C	N	A	L	N	I	P	F	F	I	L	R	S	I	S	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T												S	S																		S				S	S											T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Sequence	A	D	X	D	A	S	F	S	F	D	E	F	L	E	S	S	A	K	E	S	A	E	F	I	X	K	X	V	D	E	L	V	A	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	T	T