PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4jroC_

Fold library id	PDB Header	Molecule	Title
c4jroC_	PDB header: oxidoreductase	Chain: C: PDB Molecule: fabg protein;	PDBTitle: crystal structure of 3-oxoacyl-[acyl-carrier protein]reductase (fabg)2 from listeria monocytogenes in complex with nadp+

Links to external resources
Added to library: Sat Apr 6 09:50:23 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M T L Q G K V A V V T G G S R G I G R D I A I N L A K E G A N I F F N Y N G S P E A A E E T A K L V A E H G V E V E A M K A N V A I A E D V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
T T T T S T T
S S
T T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D A F F K Q A I E R F G R V D I L V N N A G I T R D N L L M R M K E D E W D D V I N I N L K G T F L C T K A V S R T M M K Q R A G K I I N M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
B
G G G
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A S V V G L I G N A G Q A N Y V A S K A G V I G L T K T T A R E L A P R G I N V N A V A P G F I T T D M T D K L D E K T K E A M L A Q I P L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T T B G G G T
S B S S T
T T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . .

Sequence G A Y G T T E D I A N A V L F L A S D A S K Y I T G Q T L S V D G G M V M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
B
S G G G T T
S
S T T S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	T	L	Q	G	K	V	A	V	V	T	G	G	S	R	G	I	G	R	D	I	A	I	N	L	A	K	E	G	A	N	I	F	F	N	Y	N	G	S	P	E	A	A	E	E	T	A	K	L	V	A	E	H	G	V	E	V	E	A	M	K	A	N	V	A	I	A	E	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	T						T	T	T	T	S													T	T								S	S														T	T	T										T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	A	F	F	K	Q	A	I	E	R	F	G	R	V	D	I	L	V	N	N	A	G	I	T	R	D	N	L	L	M	R	M	K	E	D	E	W	D	D	V	I	N	I	N	L	K	G	T	F	L	C	T	K	A	V	S	R	T	M	M	K	Q	R	A	G	K	I	I	N	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S			S												B		G	G	G														T																		T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	S	V	V	G	L	I	G	N	A	G	Q	A	N	Y	V	A	S	K	A	G	V	I	G	L	T	K	T	T	A	R	E	L	A	P	R	G	I	N	V	N	A	V	A	P	G	F	I	T	T	D	M	T	D	K	L	D	E	K	T	K	E	A	M	L	A	Q	I	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T							T	T	B																						G	G	G	T										S	B	S	S					T											T	T		T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Sequence	G	A	Y	G	T	T	E	D	I	A	N	A	V	L	F	L	A	S	D	A	S	K	Y	I	T	G	Q	T	L	S	V	D	G	G	M	V	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S		B														S	G	G	G	T	T			S						S	T	T	S