PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4jqrA_

Fold library id	PDB Header	Molecule	Title
c4jqrA_	PDB header: structural genomics, unknown function	Chain: A: PDB Molecule: hypothetical protein;	PDBTitle: crystal structure of a hypothetical protein (baccac_02373) from2 bacteroides caccae atcc 43185 at 2.05 a resolution

Links to external resources
Added to library: Sat Apr 13 08:22:03 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K N E V V V S F E N L L T E E N S Q F I A D G T P N N Q A F Q E T D F K D P K N L I N F N H Y Y A D W G S G Y S F A G F S Y X N I T D N Q T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S S S
B
S S
S S
T T S
S S S S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A N S P A P I T G K A K I G S V Y I G V D S T D G E Y G T P A I L T I L D T N Y K L K G T W I A N S T W A Y X G X I Q G D G Y A R A F K A G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S B T T S S
S S S S
S T T
S S T T B
S S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D W Y K V T A T G Y D E A G N E T G K A E I L L A N Y K T D N D L P V K E W I W F D L T P L Q N A V K V K F I P D S S D K N E Y G X N T A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S S T T
S
G G G T T
S S S T T S S
S

. . . . . . . . . 220 . .

Sequence Y F C L D G I T L I E K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	N	E	V	V	V	S	F	E	N	L	L	T	E	E	N	S	Q	F	I	A	D	G	T	P	N	N	Q	A	F	Q	E	T	D	F	K	D	P	K	N	L	I	N	F	N	H	Y	Y	A	D	W	G	S	G	Y	S	F	A	G	F	S	Y	X	N	I	T	D	N	Q	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S			S	S	S		B				S	S				S	S										T	T	S											S	S	S	S															S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	N	S	P	A	P	I	T	G	K	A	K	I	G	S	V	Y	I	G	V	D	S	T	D	G	E	Y	G	T	P	A	I	L	T	I	L	D	T	N	Y	K	L	K	G	T	W	I	A	N	S	T	W	A	Y	X	G	X	I	Q	G	D	G	Y	A	R	A	F	K	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T			S	B	T	T	S	S		S	S	S	S										S	T	T									S	S	T	T											B												S	S	S					T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	W	Y	K	V	T	A	T	G	Y	D	E	A	G	N	E	T	G	K	A	E	I	L	L	A	N	Y	K	T	D	N	D	L	P	V	K	E	W	I	W	F	D	L	T	P	L	Q	N	A	V	K	V	K	F	I	P	D	S	S	D	K	N	E	Y	G	X	N	T	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	S														S	S	T	T						S							G	G	G	T	T		S									S	S			T	T			S	S		S
	.	.	.	.	.	.	.	.	.	220	.	.
Sequence	Y	F	C	L	D	G	I	T	L	I	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)