PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4josA_

Fold library id	PDB Header	Molecule	Title
c4josA_	PDB header: hydrolase	Chain: A: PDB Molecule: adenosylhomocysteine nucleosidase;	PDBTitle: crystal structure of a putative 5'-methylthioadenosine/s-2 adenosylhomocysteine nucleosidase from francisella philomiragia atcc3 25017 (target nysgrc-029335)

Links to external resources
Added to library: Sat Apr 6 08:26:14 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence X K K I A I L G A X E I E I Q P I L Q K L E K Y E T V E Y A N N K Y Y V A N Y N G I E L V V A Y S K I G K V F S S L T A T I X I E H F G V D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T T T
S S T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A L L F T G V A G G L Q D L Q V G D X I A A T A T V Q H D V D I T A F G Y P Y G K I P I S E V E I A T S A R I L E Q A K V I A K E L N L N L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T T
G G G T
T T
T T S
S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence H T G V I A T G D Q F V H S A E R K D F V V K E F D A K A I E X E G A S V N L I C N E X N I P S F I L R S I S D T A D G D A P D N F D E F A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S S T T
S S T T

. . . . . . . . . 220 . . . . . . . .

Sequence K X A A N R S A D F V X K L V D R I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	K	K	I	A	I	L	G	A	X	E	I	E	I	Q	P	I	L	Q	K	L	E	K	Y	E	T	V	E	Y	A	N	N	K	Y	Y	V	A	N	Y	N	G	I	E	L	V	V	A	Y	S	K	I	G	K	V	F	S	S	L	T	A	T	I	X	I	E	H	F	G	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S																				T	T									T	T										S	S														T	T			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	L	L	F	T	G	V	A	G	G	L	Q	D	L	Q	V	G	D	X	I	A	A	T	A	T	V	Q	H	D	V	D	I	T	A	F	G	Y	P	Y	G	K	I	P	I	S	E	V	E	I	A	T	S	A	R	I	L	E	Q	A	K	V	I	A	K	E	L	N	L	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T			T	T											T	T				G	G	G	T			T	T			T	T	S		S																			T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	H	T	G	V	I	A	T	G	D	Q	F	V	H	S	A	E	R	K	D	F	V	V	K	E	F	D	A	K	A	I	E	X	E	G	A	S	V	N	L	I	C	N	E	X	N	I	P	S	F	I	L	R	S	I	S	D	T	A	D	G	D	A	P	D	N	F	D	E	F	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S																		S				S	S											T	T													S	S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Sequence	K	X	A	A	N	R	S	A	D	F	V	X	K	L	V	D	R	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)