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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4jmrA_

Fold library idPDB HeaderMoleculeTitle
c4jmrA_PDB header: viral protein/peptideChain: A: PDB Molecule: gag protein;PDBTitle: a unique spumavirus gag n-terminal domain with functional properties2 of orthoretroviral matrix and capsid


Added to library: Sat Jun 8 09:06:47 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EYELDVEALVVILRDRNIPRNPLHGEVIGLRLTEGWWGQIERFQMVRLILQNDDNEPLQRPRYEVIQRAV
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Known secondary structure (DSSP)
B
TT





TT


BTTBSS

TT



S

 .........80.........90.........100.........110.........120.........130.........140
Sequence NPHTMFMISGPLAELQLAFQDLDLPEGPLRFGPLANGHYVQGDPYSSSYRPVTMAETAQMTRDELEDVLN
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Known secondary structure (DSSP)
TTTS
TTTBTT



SGGGGGGGGTT



TT





TT

 .........150.........160.........170.
Sequence TQSEIEIQMINLLELYEVETRALRRQLAERS
Predicted secondary structure

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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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