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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4jkvA_

Fold library idPDB HeaderMoleculeTitle
c4jkvA_PDB header: membrane proteinChain: A: PDB Molecule: soluble cytochrome b562, smoothened homolog;PDBTitle: structure of the human smoothened 7tm receptor in complex with an2 antitumor agent


Added to library: Sat Apr 27 08:27:34 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GTADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDIL
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Known secondary structure (DSSP)

S
S


S

GGGSSS
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLSGQCEVPLVRTDNPKSWYEDVEGCGIQCQNPL
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Known secondary structure (DSSP) TT
TTTSSSSS

TT
S
GGGTTBSS
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence FTEAEHQDMHSYIAAFGAVTGLCTLFTLATFVADWRNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARR
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Known secondary structure (DSSP) S
TS
TTTTGGGSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence EIVCRADGTMRLGEPTSNETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGTTYQPGKTSYFHLL
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Known secondary structure (DSSP) B
TTSBB

SBS
TTS
SSS




S

T
 .........290.........300.........310.........320.........330.........340.........350
Sequence TWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSIKSNH
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Known secondary structure (DSSP) T
TTTTSSS
TS
 .........360.........370.........380.........390.........400.........410.........420
Sequence PGLLSEKAASKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEWERSFRDYVLCQANCEIKNRPSLL
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Known secondary structure (DSSP) TTSSSSSSS



S



 .........430.........440.........450....
Sequence VEKINLFAMFGTGIAMSTWVWTKATLLIWRRTWC
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Known secondary structure (DSSP) GGGG
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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