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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4jjaA_

Fold library idPDB HeaderMoleculeTitle
c4jjaA_PDB header: structural genomics, unknown functionChain: A: PDB Molecule: hypothetical protein;PDBTitle: crystal structure of a hypothetical protein (bf0379) from bacteroides2 fragilis nctc 9343 at 1.30 a resolution


Added to library: Sat Apr 6 08:29:55 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SDVIIGAEQTKAYFPILKNKRIAIFSNHTGXVGNKHLLDILLENNFNVVAIFSPEHGFRGNTIDSKTGVP
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Known secondary structure (DSSP)


B
GGG
TT


TT
TTTT
SSS
TT


B
TTT

B
 .........80.........90.........100.........110.........120.........130.........140
Sequence ILSLKPSEASXKKFDILIVDIQDVGLRFYTYYISXVRLXDACAEYDRKILILDRPNPNGHYVDGPILDXK
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Known secondary structure (DSSP)



TT
S





BTTSTTT




TTTT

BS



GG
 .........150.........160.........170.........180.........190.........200.........210
Sequence YKSGVGGLPIPIVHGXTLGELALXVNGERWLPSSRICDVTVIPCKNYTHQTXYRLPIPPSPNLPNXKAIY
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Known secondary structure (DSSP) G
BTTB
SS

SB



TT
SGGG





BS

TT




SS
SSTT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LYPSICLFEGTPVSLGRGTTLPFQVYGHPNXTGYNYNFTPRSIPGAKNPPQLNKLCHGVNLSNLSDEEIW
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Known secondary structure (DSSP) GGGGGSS
B
STTSSSTTSTT

S
S




BTTBSS
TTTT


TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence KKGINLDYLIDAYHNLNXGDRFFRPFFELLVGTDYVRKXIEGGKSADEIKARWKRDVERFKIQRKPYLLY
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Known secondary structure (DSSP) SS
T

GGGGS
TT
SSTT

TGGG

S
 ...
Sequence QDN
Predicted secondary structure


SS confidence


Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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