PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4jisB_

Fold library id	PDB Header	Molecule	Title
c4jisB_	PDB header: transferase	Chain: B: PDB Molecule: ribitol-5-phosphate cytidylyltransferase;	PDBTitle: crystal structure of ribitol 5-phosphate cytidylyltransferase (tari)2 from bacillus subtilis

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Added to library: Sat Mar 15 08:17:37 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G M I Y A E I L A P K Q F L P L N K R P I I I H T V E K F L L N D R F D K I L I V S P K E W I N H T K D I L K K F I G Q D D R L V V V E G G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S T T T
T T
S
G G G T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S D R N E S I M S G I R Y I E K E F G I Q D N D V I I T H D S V R P F L T H R I I D E N I D A V L Q Y G A V D T V I S A I D T I I A S E D Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T
T T
T T
T T
S
S
B
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E F I S D I P V R D N M Y Q G Q T P Q S F R I S K L V E L Y N K L S D E Q K A V L T D A C K I C S L A G E K V K L V R G E V F N I K V T T P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
B
S S
T T S
T T T
T T
S T

. . . . . . . . .

Sequence Y D L K V A N A I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	M	I	Y	A	E	I	L	A	P	K	Q	F	L	P	L	N	K	R	P	I	I	I	H	T	V	E	K	F	L	L	N	D	R	F	D	K	I	L	I	V	S	P	K	E	W	I	N	H	T	K	D	I	L	K	K	F	I	G	Q	D	D	R	L	V	V	V	E	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											G	G	G	S			T	T													T		T	T		S								G	G	G												T				T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	D	R	N	E	S	I	M	S	G	I	R	Y	I	E	K	E	F	G	I	Q	D	N	D	V	I	I	T	H	D	S	V	R	P	F	L	T	H	R	I	I	D	E	N	I	D	A	V	L	Q	Y	G	A	V	D	T	V	I	S	A	I	D	T	I	I	A	S	E	D	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S																T				T	T								T	T		T	T																	S										S				B		S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	F	I	S	D	I	P	V	R	D	N	M	Y	Q	G	Q	T	P	Q	S	F	R	I	S	K	L	V	E	L	Y	N	K	L	S	D	E	Q	K	A	V	L	T	D	A	C	K	I	C	S	L	A	G	E	K	V	K	L	V	R	G	E	V	F	N	I	K	V	T	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S			B					S	S																				T	T	S																	T	T	T										T	T						S	T
	.	.	.	.	.	.	.	.	.
Sequence	Y	D	L	K	V	A	N	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T