Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4jgwB_

Fold library idPDB HeaderMoleculeTitle
c4jgwB_PDB header: signaling proteinChain: B: PDB Molecule: ral guanine nucleotide dissociation stimulator-like 2;PDBTitle: the conformation of a docking site for sh3 domains is pre-selected in2 the guanine nucleotide exchange factor rlf


Added to library: Sat Sep 14 08:26:29 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ASVSVWDEEEDGATFTVTSRQYPLPPPRSSRRLRAGTLEALVRHLLDARTAGADMMFTPALLATHRAFTS
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP)
TT






T
TT
TTGGGTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence TPALFGLVADRLEALESYPPGELERTTGVAISVLSTWLASHPEDFGSEVKGQLDRLESFLLRTGYSADLI
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP) TTSSS

GGG
SGGG


 .........150.........160.........170.........180.........190.........200.........210
Sequence RNLRARVDPADPTDVLVFLADHLAEQLTLLDAELFLNLIPSQCLGGLWGHRDRPGHSHLCPSVRATVTQF
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)



GGGGGGS
S

GGGGSTTTTSTT
SSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence NKVAGAVVSSVLGATSIGEGPREVTVRPLRPPQRARLLEKWIRVAEECRLLRNFSSVYAVVSALQSSPIH
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) TT
SSSTT




TTBS
 .........290.........300.........310.........320.........330.........340.........350
Sequence RLRAAWGETTRDSLRVFSSLCQIFELLTGVVPYLGTFLKDLVMLDAASKDELENGYINFDKRRKEFAILS
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) T
TS
TT






B

S
SB
TTS
 .........360.........370.........380.........390......
Sequence ELLRLQKECRGYDLRPNSDIQQWLQGLQPLTEAQSHRVSCEVEPPG
Predicted secondary structure




















SS confidence













































Known secondary structure (DSSP) TT





T




S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D