PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4jgbB_

Fold library id	PDB Header	Molecule	Title
c4jgbB_	PDB header: protein binding	Chain: B: PDB Molecule: putative exported protein;	PDBTitle: crystal structure of putative exported protein from burkholderia2 pseudomallei

Links to external resources
Added to library: Sat Apr 6 09:42:23 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M L K I A L F G A T G M I G S R I A A E A A R R G H Q V T A L S R N P A N V Q A K A A D L F D P A S I A A A L A G Q D V V A S A Y G P K Q E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T S T T
S
S
T T
T T
S
T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E A S K V V A V A K A L V D G A R K A G V K R V V V V G G A G T L E V A P G K Q L V D T E G F P D A Y K A V A L A H R D A Y G Y L S T V Q D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T
G G G
T T G G G S T T
G G G T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . .

Sequence L D W T F F S P A A L I A P G E R T G R F R T G A G R L I V D E Q G N S K I S A E D Y A I A F V D E I E Q G R F I R Q A A T A A Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
S S B
T T S
T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	L	K	I	A	L	F	G	A	T	G	M	I	G	S	R	I	A	A	E	A	A	R	R	G	H	Q	V	T	A	L	S	R	N	P	A	N	V	Q	A	K	A	A	D	L	F	D	P	A	S	I	A	A	A	L	A	G	Q	D	V	V	A	S	A	Y	G	P	K	Q	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	T	T	S													T	T								S					S							T	T										T	T		S								T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	A	S	K	V	V	A	V	A	K	A	L	V	D	G	A	R	K	A	G	V	K	R	V	V	V	V	G	G	A	G	T	L	E	V	A	P	G	K	Q	L	V	D	T	E	G	F	P	D	A	Y	K	A	V	A	L	A	H	R	D	A	Y	G	Y	L	S	T	V	Q	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G																T										G	G	G					T	T			G	G	G	S	T	T			G	G	G																T			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Sequence	L	D	W	T	F	F	S	P	A	A	L	I	A	P	G	E	R	T	G	R	F	R	T	G	A	G	R	L	I	V	D	E	Q	G	N	S	K	I	S	A	E	D	Y	A	I	A	F	V	D	E	I	E	Q	G	R	F	I	R	Q	A	A	T	A	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S									S				S											S	S	B					T	T	S																					T	T	T	T