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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4jf7B_

Fold library idPDB HeaderMoleculeTitle
c4jf7B_PDB header: viral proteinChain: B: PDB Molecule: hemagglutinin-neuraminidase;PDBTitle: structure of the parainfluenza virus 5 (piv5) hemagglutinin-2 neuraminidase (hn) ectodomain


Added to library: Sat Sep 7 08:23:15 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LNNILSVANQIIYNSAVALPLQLDTLESTLLTAIKSLQTSDKLEQNCSWSAALINDNRYINGINQFYFSI
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Known secondary structure (DSSP)

STTTTTGGG


GGGS


TSSSS

B
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence AEGRNLTLGPLLNMPSFIPTATTPEGCTRIPSFSLTKTHWCYTHNVILNGCQDHVSSNQFVSMGIIEPTS
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Known secondary structure (DSSP) TGGGG



SS


SSTT

SS
SSSS

SS


T
 .........150.........160.........170.........180.........190.........200.........210
Sequence AGFPFFRTLKTLYLSDGVNRKSCSISTVPGGCMMYCFVSTQPERDDYFSAAPPEQRIIIMYYNDTIVERI
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Known secondary structure (DSSP) TSS
SS

TT

S
SSS


TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence INPPGVLDVWATLNPGTGSGVYYLGWVLFPIYGGVIKGTSLWNNQANKYFIPQMVAALCSQNQATQVQNA
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Known secondary structure (DSSP)


TT
TTT
BS

TT
TTSTT




TTSGGG

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence KSSYYSSWFGNRMIQSGILACPLRQDLTNECLVLPFSNDQVLMGAEGRLYMYGDSVYYYQRSNSWWPMTM
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Known secondary structure (DSSP) TTTTTTSS
TT
SS



TTSS
S


TT


SS

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence LYKVTITFTNGQPSAISAQNVPTQQVPRPGTGDCSATNRCPGFCLTGVYADAWLLTNPSSTSTFGSEATF
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Known secondary structure (DSSP) TT









SGGGSTT

S








B
SB
GGGSSSTTSS

 .........430.........440.........450.........460.........470.........480.........490
Sequence TGSYLNTATQRINPTMYIANNTQIISSQQFGSSGQEAAYGHTTCFRDTGSVMVYCIYIIELSSSLLGQFQ
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Known secondary structure (DSSP)
SSSSSB

SS

SSTT
BTTTT
SSS
S
 .........500.
Sequence IVPFIRQVTLS
Predicted secondary structure
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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