PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4jd0A_

Fold library id	PDB Header	Molecule	Title
c4jd0A_	PDB header: transferase	Chain: A: PDB Molecule: nucleotidyl transferase;	PDBTitle: structure of the inositol-1-phosphate ctp transferase from t.2 maritima.

Links to external resources
Added to library: Sat Sep 21 08:51:57 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence F Q G A M R E A I V L A S G A G K R L R S V T G D V P K V F Y R F D G C E L V K Y P M I S L M K N G V E R F V L V V S E G Y R D L G E K V L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
G G G T T S
G G G S T T T T T T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N D L G V E G I V V E N K K V E L G N A Y S F F L S E P Y V E S E K F F L S C G D S L F P P S A L K S A F S E D E F H I K L G V S K R S D L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
G G G
T G G G
S S T T
G G G G G G G
B
S
S
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I D P E K A S K V L V N E N R I V K I G K R I D Q Y N Y F D T G V F V M T K K V Y S L K E S F S W T E D I S L Y H V L Q K A V D T G M I V K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T S
T T S S
S S
S G G G G G G G G G S
S S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . .

Sequence V F D F G N A L W T E I D S P A D L N S K V Y E L M S K I K E G V A C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S G G G
S T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	Q	G	A	M	R	E	A	I	V	L	A	S	G	A	G	K	R	L	R	S	V	T	G	D	V	P	K	V	F	Y	R	F	D	G	C	E	L	V	K	Y	P	M	I	S	L	M	K	N	G	V	E	R	F	V	L	V	V	S	E	G	Y	R	D	L	G	E	K	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B															G	G	G					T	T	S		G	G	G	S			T	T			T	T									T	T	T										T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	D	L	G	V	E	G	I	V	V	E	N	K	K	V	E	L	G	N	A	Y	S	F	F	L	S	E	P	Y	V	E	S	E	K	F	F	L	S	C	G	D	S	L	F	P	P	S	A	L	K	S	A	F	S	E	D	E	F	H	I	K	L	G	V	S	K	R	S	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T									S		G	G	G									T	G	G	G			S	S							T	T					G	G	G	G	G	G	G		B			S		S										S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	D	P	E	K	A	S	K	V	L	V	N	E	N	R	I	V	K	I	G	K	R	I	D	Q	Y	N	Y	F	D	T	G	V	F	V	M	T	K	K	V	Y	S	L	K	E	S	F	S	W	T	E	D	I	S	L	Y	H	V	L	Q	K	A	V	D	T	G	M	I	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		T	T	T	S							T	T							S	S		S	S		S											G	G	G	G	G	G	G	G	G	S			S	S														T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Sequence	V	F	D	F	G	N	A	L	W	T	E	I	D	S	P	A	D	L	N	S	K	V	Y	E	L	M	S	K	I	K	E	G	V	A	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T								S	G	G	G		S											T	T	T