PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4jb7A_

Fold library id	PDB Header	Molecule	Title
c4jb7A_	PDB header: cell invasion	Chain: A: PDB Molecule: accessory colonization factor acfc;	PDBTitle: 1.42 angstrom resolution crystal structure of accessory colonization2 factor acfc (acfc) in complex with d-aspartic acid

Links to external resources
Added to library: Sat Apr 20 08:36:06 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A D V N L Y G P G G P H V P L I K V A E S F E K S Q S K R V N I T F G P Q A T W N D K A K K N A D I L F G A S E H S A L A I A E G H S E R F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T S S
S
S S S T T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S K F N I H P V F X R E A I I L V K K G N P K N I K G X A D L L K P G I G I V V N D G A G V S N T S G T A V W E D S V G R X K N V E K L Q A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T T
T T
S G G G G G S T T
T T T S
T T T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence F R S N I H V F A P N S G S A R K A F V D G E D I D A W I T W V D W A I A N P T I G D X V R X E D E Y R I Y R D F N V V L A K N P S S E A I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S
T T
T T T
G G G
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . .

Sequence D F F D Y L T K S K D A E A I F Q H Y G W F K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
B

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	D	V	N	L	Y	G	P	G	G	P	H	V	P	L	I	K	V	A	E	S	F	E	K	S	Q	S	K	R	V	N	I	T	F	G	P	Q	A	T	W	N	D	K	A	K	K	N	A	D	I	L	F	G	A	S	E	H	S	A	L	A	I	A	E	G	H	S	E	R	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	T															S	S								S														S					S	S										T	T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	K	F	N	I	H	P	V	F	X	R	E	A	I	I	L	V	K	K	G	N	P	K	N	I	K	G	X	A	D	L	L	K	P	G	I	G	I	V	V	N	D	G	A	G	V	S	N	T	S	G	T	A	V	W	E	D	S	V	G	R	X	K	N	V	E	K	L	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G															T	T		T	T				S	G	G	G	G	G	S	T	T									T	T	T	S			T	T	T	T								T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	R	S	N	I	H	V	F	A	P	N	S	G	S	A	R	K	A	F	V	D	G	E	D	I	D	A	W	I	T	W	V	D	W	A	I	A	N	P	T	I	G	D	X	V	R	X	E	D	E	Y	R	I	Y	R	D	F	N	V	V	L	A	K	N	P	S	S	E	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T						S	S												T	T															T	T	T								G	G	G												S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Sequence	D	F	F	D	Y	L	T	K	S	K	D	A	E	A	I	F	Q	H	Y	G	W	F	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T	T		B