PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4jatB_

Fold library id	PDB Header	Molecule	Title
c4jatB_	PDB header: transferase	Chain: B: PDB Molecule: alpha-pyrone synthesis polyketide synthase-like pks11;	PDBTitle: crystal structure of mycobacterium tuberculosis pks11 reveals2 intermediates in the synthesis of methyl-branched alkylpyrones

Links to external resources
Added to library: Sat Apr 27 08:33:20 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S V I A G V F G A L P P H R Y S Q S E I T D S F V E F P G L K E H E E I I R R L H A A A K V N G R H L V L P L Q Q Y P S L T D F G D A N E I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T S T T T G G G T
S S
G G G G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F I E K A V D L G V E A L L G A L D D A N L R P S D I D M I A T A T V T G V A V P S L D A R I A G R L G L R P D V R R M P L F G L G S V A G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G
S S S
S S
T
T T
S
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A A G V A R L R D Y L R G A P D D V A V L V S V E L C S L T Y P A V K P T V S S L V G T A L F G D G A A A V V A V G D R R A E Q V R A G G P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
G G G G G G G
S
B
T
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence D I L D S R S S L Y P D S L H I M G W D V G S H G L R L R L S P D L T N L I E R Y L A N D V T T F L D A H R L T K D D I G A W V S H P G G P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
G G G T T
T T T T T
G G G

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence K V I D A V A T S L A L P P E A L E L T W R S L G E I G N L S S A S I L H I L R D T I E K R P P S G S A G L M L A M G P G F C T E L V L L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T T T
B
G G G T
T T
T T T

. .

Sequence W R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	V	I	A	G	V	F	G	A	L	P	P	H	R	Y	S	Q	S	E	I	T	D	S	F	V	E	F	P	G	L	K	E	H	E	E	I	I	R	R	L	H	A	A	A	K	V	N	G	R	H	L	V	L	P	L	Q	Q	Y	P	S	L	T	D	F	G	D	A	N	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S													T	T	S	T	T	T	G	G	G											T								S	S		G	G	G	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	I	E	K	A	V	D	L	G	V	E	A	L	L	G	A	L	D	D	A	N	L	R	P	S	D	I	D	M	I	A	T	A	T	V	T	G	V	A	V	P	S	L	D	A	R	I	A	G	R	L	G	L	R	P	D	V	R	R	M	P	L	F	G	L	G	S	V	A	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T			G	G	G		S							S	S				S	S											T			T	T								S		G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	A	G	V	A	R	L	R	D	Y	L	R	G	A	P	D	D	V	A	V	L	V	S	V	E	L	C	S	L	T	Y	P	A	V	K	P	T	V	S	S	L	V	G	T	A	L	F	G	D	G	A	A	A	V	V	A	V	G	D	R	R	A	E	Q	V	R	A	G	G	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T		T	T											G	G	G	G	G	G	G			S											B																			T			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	I	L	D	S	R	S	S	L	Y	P	D	S	L	H	I	M	G	W	D	V	G	S	H	G	L	R	L	R	L	S	P	D	L	T	N	L	I	E	R	Y	L	A	N	D	V	T	T	F	L	D	A	H	R	L	T	K	D	D	I	G	A	W	V	S	H	P	G	G	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T		G	G	G							T	T								T	T																			T	T	T			G	G	G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	K	V	I	D	A	V	A	T	S	L	A	L	P	P	E	A	L	E	L	T	W	R	S	L	G	E	I	G	N	L	S	S	A	S	I	L	H	I	L	R	D	T	I	E	K	R	P	P	S	G	S	A	G	L	M	L	A	M	G	P	G	F	C	T	E	L	V	L	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T			T	T	T	T												B		G	G	G												T				T	T										T	T	T
	.	.
Sequence	W	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)