Fold library entry viewer: c4j5tA_

Added to library: Sat Apr 6 08:34:10 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	E	F	M	E	E	Y	Q	K	F	T	N	E	S	L	L	W	A	P	Y	R	S	N	C	Y	F	G	M	R	P	R	Y	V	H	E	S	P	L	I	M	G	I	M	W	F	N	S	L	S	Q	D	G	L	H	S	L	R	H	F	A	T	P	Q	D	K	L	Q	K	Y	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S	S	S	B			T	T	B	S	S			B		T	T			S	S											T	T	S	T	T	G	G	G	G		B		B			G	G	G			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	W	E	V	Y	D	P	R	I	G	G	K	E	V	F	I	D	E	K	N	N	L	N	L	T	V	Y	F	V	K	S	K	N	G	E	N	W	S	V	R	V	Q	G	E	P	L	D	P	K	R	P	S	T	A	S	V	V	L	Y	F	S	Q	N	G	G	E	I	D	G	K	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T									T	T	T	T											T	T	S	S											S	S	T	T	S																			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	L	A	M	I	G	H	D	G	P	N	D	M	K	F	F	G	Y	S	K	E	L	G	E	Y	H	L	T	V	K	D	N	F	G	H	Y	F	K	N	P	E	Y	E	T	M	E	V	A	P	G	S	D	C	S	K	T	S	H	L	S	L	Q	I	P	D	K	E	V	W	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	S	S									T	T	T														B				T	T	S	S				S	B	T	T	B		T	T	S										G	G	G	G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	R	D	V	F	Q	S	L	V	S	D	S	I	R	D	I	L	E	R	P	A	D	L	I	P	S	V	L	T	I	R	N	L	Y	N	F	N	P	G	N	F	H	Y	I	Q	K	T	F	D	L	T	K	K	D	G	F	Q	F	D	I	T	Y	N	K	L	G	T	T	Q	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T				G	G	G					T	S				T	T						S										T	T	S	T	T											T	T		S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	S	T	R	E	Q	V	T	E	L	I	T	W	S	L	N	E	I	N	A	R	F	D	K	Q	F	S	F	G	E	G	P	D	S	I	E	S	V	E	V	K	R	R	F	A	L	E	T	L	S	N	L	L	G	G	I	G	Y	F	Y	G	N	Q	L	I	D	R	E	T	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																														S		S	S			S																			T													S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	F	D	E	S	Q	F	T	E	I	K	L	L	N	A	K	E	E	G	P	F	E	L	F	T	S	V	P	S	R	G	F	F	P	R	G	F	Y	W	D	E	G	F	H	L	L	Q	I	M	E	Y	D	F	D	L	A	F	E	I	L	A	S	W	F	E	M	I	E	D	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T			S						S														S	B	T	T	T	B		S																														T	T			T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	W	I	A	R	E	I	I	L	G	N	E	A	R	S	K	V	P	Q	E	F	Q	V	Q	N	P	N	I	A	N	P	P	T	L	L	L	A	F	S	E	M	L	S	R	A	I	E	N	I	G	D	F	M	T	N	N	L	E	A	N	P	G	L	L	T	E	Y	A	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S										T	T	S		G	G	G	T				T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	I	Y	P	K	L	L	K	H	Y	N	W	F	R	K	S	Q	T	G	L	I	D	E	Y	E	E	I	L	E	D	E	G	I	W	D	K	I	H	K	N	E	V	Y	R	W	V	G	R	T	F	T	H	C	L	P	S	G	M	D	D	Y	P	R	A	Q	P	P	D	V	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	B				S	T	T								T		G	G	G	S		T	T	S		B			T	T			S	S			G	G	G	S		T	T	S				S	S			T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	N	V	D	A	L	A	W	V	G	V	M	T	R	S	M	K	Q	I	A	H	V	L	K	L	T	Q	D	E	Q	R	Y	A	Q	I	E	Q	E	V	V	E	N	L	D	L	L	H	W	S	E	N	D	N	C	Y	C	D	I	S	I	D	P	E	D	D	E	I	R	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B																						T	T																						T	T			T	T	T	T									T	T	T	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	V	C	H	E	G	Y	V	S	V	L	P	F	A	L	K	L	I	P	K	N	S	P	K	L	E	K	V	V	A	L	M	S	D	P	E	K	I	F	S	D	Y	G	L	L	S	L	S	R	Q	D	D	Y	F	G	K	D	E	N	Y	W	R	G	P	I	W	M	N	I	N	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B									T	T		S		T	T		T												T	T	T	T			T	T			B	S	B		T	T	S	T	T	T	T		T	T		S	S	S	S		B
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	L	C	L	D	A	M	R	Y	Y	Y	P	E	V	I	L	D	V	A	G	E	A	S	N	A	K	K	L	Y	Q	S	L	K	I	N	L	S	N	N	I	Y	K	V	W	E	E	Q	G	Y	C	Y	E	N	Y	S	P	I	D	G	H	G	T	G	A	E	H	F	T	G	W	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											G	G	G	G	S			S	S																											T	S	S			S				T	T	T					S	S	S	S		T	T	G	G
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.
Sequence	A	L	V	V	N	I	L	G	R	F	R	S	H	H	H	H	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G											S

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PDB structure

FASTA sequence

Hidden Markov model

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