Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4j3cB_

Fold library idPDB HeaderMoleculeTitle
c4j3cB_PDB header: transferaseChain: B: PDB Molecule: ribosomal rna small subunit methyltransferase e;PDBTitle: crystal structure of 16s ribosomal rna methyltransferase rsme


Added to library: Sat Feb 23 08:22:51 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XQRLFIENALHAGAKHEATREQFNYLINVLRLGEGSSLLVFNGRDGEWRAEIAXPSRQAVLVAVEQTRPQ
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)


SS

STT


TTS


TT

SSS

S





 .........80.........90.........100.........110.........120.........130.........140
Sequence PAPCDLVYLFAPLVGRLDYLVQKAVEXGAGVLQPVXTQHVQGKIGSLERVRANVIEAAEQCGVLGIPAVE
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)









TT
S
TT

S



T

S


 .........150.........160.........170.........180.........190.........200.........210
Sequence EPRKLEDLLIDWPRDRRIVFCNDSQNPLPILEGIAERRLALLIGPEGGFSEAERDLLRSRDFVTAIPLGP
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP)

TTT

TTS



S
T


SS

TT


T
TT



S
 .........220.........230....
Sequence RILRADTAAVAAXAVIQATLGDWR
Predicted secondary structure





SS confidence























Known secondary structure (DSSP) S


STT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D