Fold library entry viewer: c4j0mA_

Added to library: Sat Jul 27 11:41:48 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	F	N	E	T	A	L	L	L	A	F	K	Q	N	S	V	K	S	D	P	N	N	V	L	G	N	W	K	Y	E	G	S	C	S	W	R	G	V	S	C	S	D	D	G	R	I	V	G	L	D	L	R	N	S	G	L	T	G	T	L	N	L	V	N	L	T	A	L	P	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T					T	T		T	T	T	T						G	G	G	S	T	T					T	T	S								T	T	S													T	S	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	Q	N	L	Y	L	Q	G	N	Y	F	S	S	G	G	D	S	S	G	S	D	C	Y	L	Q	V	L	D	L	S	S	N	S	I	S	D	Y	S	M	V	D	Y	V	F	S	K	C	S	N	L	V	S	V	N	I	S	N	N	K	L	V	G	K	L	G	F	A	P	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S						S		S			S					S						S	S																T	T								S	S											T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	Q	S	L	T	T	V	D	L	S	Y	N	I	L	S	D	K	I	P	E	S	F	I	S	D	F	P	A	S	L	K	Y	L	D	L	T	H	N	N	L	S	G	D	F	S	D	L	S	F	G	I	C	G	N	L	T	F	F	S	L	S	Q	N	N	L	S	G	D	K	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T								S	S				S	B			T	T	T	T	T	T	S		T	T								S	S						G	G	G					S		S	S								S	S					S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	P	I	T	L	P	N	C	K	F	L	E	T	L	N	I	S	R	N	N	L	A	G	K	I	P	N	G	E	Y	W	G	S	F	Q	N	L	K	Q	L	S	L	A	H	N	R	L	S	G	E	I	P	P	E	L	S	L	L	C	K	T	L	V	I	L	D	L	S	G	N	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	G	G	G		T	T								S	S				S	B				T	T	T	T	T	T		S	S								S	S			B	S	B			G	G	G	G	G	G	G	G	T		S						S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	F	S	G	E	L	P	S	Q	F	T	A	C	V	W	L	Q	N	L	N	L	G	N	N	Y	L	S	G	D	F	L	N	T	V	V	S	K	I	T	G	I	T	Y	L	Y	V	A	Y	N	N	I	S	G	S	V	P	I	S	L	T	N	C	S	N	L	R	V	L	D	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							G	G	G	G	G		T	T								S	S				S	S					T	G	G	G		T	T								S	S								G	G	G	G	G		T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	S	N	G	F	T	G	N	V	P	S	G	F	C	S	L	Q	S	S	P	V	L	E	K	I	L	I	A	N	N	Y	L	S	G	T	V	P	M	E	L	G	K	C	K	S	L	K	T	I	D	L	S	F	N	E	L	T	G	P	I	P	K	E	I	W	M	L	P	N	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S				S				S		S	S	S	S		S	S										S	S				S				G	G	G	G	G		T	T								S	S												T		T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	D	L	V	M	W	A	N	N	L	T	G	T	I	P	E	G	V	C	V	K	G	G	N	L	E	T	L	I	L	N	N	N	L	L	T	G	S	I	P	E	S	I	S	R	C	T	N	M	I	W	I	S	L	S	S	N	R	L	T	G	K	I	P	S	G	I	G	N	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S				S				T	T	T	T	T	S	S				S						S	S				S				G	G	G	G	G		T	T								S	S				S	B			G	G	G	G	G		T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	L	A	I	L	Q	L	G	N	N	S	L	S	G	N	V	P	R	Q	L	G	N	C	K	S	L	I	W	L	D	L	N	S	N	N	L	T	G	D	L	P	G	E	L	A	S	Q	A	G	L	V	M	P	G	S	V	S	G	K	Q	F	A	F	V	R	N	E	G	G	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T								S	S								G	G	G	G	G		T	T								S	S				S	B			G	G	G	G	T	T	T	T	T	B				T	T	T	T									S			S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	D	C	R	G	A	G	G	L	V	E	F	E	G	I	R	A	E	R	L	E	R	L	P	M	V	H	S	C	P	A	T	R	I	Y	S	G	M	T	M	Y	T	F	S	A	N	G	S	M	I	Y	F	D	I	S	Y	N	A	V	S	G	F	I	P	P	G	Y	G	N	M	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T	S	S						T	T			G	G	G	G	G	G	S	T	T	T	T	T	S													S		S	S	S	B			S						S	S			B	S	B			G	G	G	G	G		T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	Y	L	Q	V	L	N	L	G	H	N	R	I	T	G	T	I	P	D	S	F	G	G	L	K	A	I	G	V	L	D	L	S	H	N	N	L	Q	G	Y	L	P	G	S	L	G	S	L	S	F	L	S	D	L	D	V	S	N	N	N	L	T	G	P	I	P	F	G	G	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T								S	S								G	G	G	G	G		T	T		S						S	S								G	G	G	G	G		T	T								S	S									S	T	T	G
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.
Sequence	T	T	F	P	V	S	R	Y	A	N	N	S	G	L	C	G	V	P	L	R	P	C	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	S		G	G	G	G		S		S	S			S	T	T	S	S		T	T

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PDB structure

FASTA sequence

Hidden Markov model

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