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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4iu8A_

Fold library idPDB HeaderMoleculeTitle
c4iu8A_PDB header: transport proteinChain: A: PDB Molecule: nitrite extrusion protein 2;PDBTitle: crystal structure of a membrane transporter (selenomethionine2 derivative)


Added to library: Sat Apr 20 11:06:07 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LLRDWKPENPAFWENKGKHIARRNLWISVSCLLLAFCVWXLFSAVTVNLNKIGFNFTTDQLFLLTALPSV
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Known secondary structure (DSSP)

S


TTSTTTT
TTTTTSS



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence SGALLRVPYSFXVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFAGANFASSXGN
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Known secondary structure (DSSP) TTTTGGG
TTTT
SS

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence ISFFFPKAKQGSALGINGGLGNLGVSVXQLVAPLVIFVPVFAFLGVNGVPQADGSVXSLANAAWIWVPLL
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Known secondary structure (DSSP) GGGS
TTTTTTS
SSGGGT



TTS

TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence AIATIAAWSGXNDIALWLLSLLYLATFGSFIGFSAGFAXLAKTQFPDVNILRLAFFGPFIGAIARSVGGA
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Known secondary structure (DSSP) TT





TTSS
TTS
GGGTTTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence ISDKFGGVRVTLINFIFXAIFSALLFLTLPGTGSGNFIAFYAVFXGLFLTAGLGSGSTFQXIAVIFRQIT
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Known secondary structure (DSSP) TT
SGGGSSSSSS


 .........360.........370.........380.........390.........400.........410.........420
Sequence IYRVKXKGQAHKEAVTETAAALGFISAIGAVGGFFIPQAFGXSLNXTGSPVGAXKVFLIFYIVCVLLTWL
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Known secondary structure (DSSP)

TTTTTTSSSSSSTT
 ..
Sequence VY
Predicted secondary structure
SS confidence

Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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