PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4iu2A_

Fold library id	PDB Header	Molecule	Title
c4iu2A_	PDB header: structural protein	Chain: A: PDB Molecule: cell-wall anchoring protein;	PDBTitle: cohesin-dockerin -x domain complex from ruminococcus flavefacience

Links to external resources
Added to library: Sat Apr 27 08:21:32 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence H H H H H A X A L T D R G X T Y D L D P K D G S S A A T K P V L E V T K K V F D T A A D A A G Q T V T V E F K V S G A E G K Y A T T G Y H I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S S
T T
S
S S T T
S
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Y W D E R L E V V A T K T G A Y A K K G A A L E D S S L A K A E N N G N G V F V A S G A D D D F G A D G V X W T V E L K V P A D A K A G D V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T S
S
G G G T T
S
S S
S S S
S
T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . .

Sequence Y P I D V A Y Q W D P S K G D L F T D N K D S A Q G K L X Q A Y F F T Q G I K S S S N P S T D E Y L V K A N A T Y A D G Y I A I K A G E P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T T S
S S S
T T
T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	H	H	H	H	A	X	A	L	T	D	R	G	X	T	Y	D	L	D	P	K	D	G	S	S	A	A	T	K	P	V	L	E	V	T	K	K	V	F	D	T	A	A	D	A	A	G	Q	T	V	T	V	E	F	K	V	S	G	A	E	G	K	Y	A	T	T	G	Y	H	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S										S	S	S				T	T		S													S	S					T	T											S		T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	W	D	E	R	L	E	V	V	A	T	K	T	G	A	Y	A	K	K	G	A	A	L	E	D	S	S	L	A	K	A	E	N	N	G	N	G	V	F	V	A	S	G	A	D	D	D	F	G	A	D	G	V	X	W	T	V	E	L	K	V	P	A	D	A	K	A	G	D	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S						T	T	S		S					G	G	G	T	T		S								S	S									S	S	S				S												T	T			T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Sequence	Y	P	I	D	V	A	Y	Q	W	D	P	S	K	G	D	L	F	T	D	N	K	D	S	A	Q	G	K	L	X	Q	A	Y	F	F	T	Q	G	I	K	S	S	S	N	P	S	T	D	E	Y	L	V	K	A	N	A	T	Y	A	D	G	Y	I	A	I	K	A	G	E	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T								T	T															T	T	S			S	S	S										T	T		T	T