Fold library entry viewer: c4issA_

Added to library: Sat Jun 22 08:56:04 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	E	S	T	L	G	W	S	V	Q	D	W	L	S	F	H	S	K	S	T	P	T	K	S	L	E	L	L	E	N	L	L	K	S	Q	K	P	A	P	E	D	P	A	W	I	S	L	I	P	V	E	D	L	H	H	Q	W	N	I	L	Q	S	K	S	N	K	E	E	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T													S																			T	T	T	S	T	T																					S			S	S		T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	Y	G	V	P	I	A	V	K	D	N	I	D	Y	K	G	L	P	T	T	A	A	C	P	S	Y	L	Y	Q	P	T	R	D	S	Y	V	V	E	L	L	R	D	A	G	A	V	V	I	G	K	T	N	L	D	Q	F	A	T	G	L	V	G	T	R	S	P	Y	G	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T							T	T	B			T	T	S		B		T	T		G	G	G		B			S	S											T	T										S	G	G	G			S	S	S				T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	C	V	F	N	D	K	Y	V	S	G	G	S	S	A	G	S	A	S	V	V	G	R	G	I	V	P	L	S	L	G	T	D	T	A	G	S	G	R	V	P	A	A	L	N	N	L	I	G	L	K	P	T	K	G	A	F	S	C	R	G	V	V	P	A	C	K	S	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B		T	T		T	T	B	B			S	S	S									T	T	S	S	S							S	S	S	T	T	T					T	T	T								T	T	S	B			T	T	B			S	S	T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	C	V	S	V	F	A	L	N	L	S	D	A	E	I	A	F	K	V	X	N	K	P	D	L	L	E	D	E	Y	S	R	E	F	P	K	N	P	I	S	Q	Y	P	K	D	L	T	I	A	I	P	K	E	V	P	W	F	G	E	T	E	N	P	K	L	Y	T	K	A	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S												B				T	T	T		T	T						S	S							T	T							S					T	T			S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	L	K	N	T	G	A	K	I	V	V	V	D	F	E	P	L	L	E	L	A	R	C	L	Y	E	G	A	W	V	A	E	R	Y	C	A	T	R	D	F	L	A	T	N	P	P	E	S	S	L	D	E	T	V	V	N	I	I	K	G	A	V	K	F	D	A	A	D	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T																					S	S	T													T	T				G	G	G	S										G	G	G	G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	K	F	E	Y	K	R	Q	G	I	L	Q	K	V	N	L	L	L	K	D	I	D	V	L	C	V	P	T	C	P	L	N	P	K	L	E	E	V	A	Q	E	P	V	L	V	N	S	R	Q	G	T	W	T	N	F	V	N	L	A	D	L	A	A	L	A	V	P	S	G	F	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T		S						S		S				B							S	T	T							T	T	T	T	T	T	T	G	G	G	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	D	G	L	P	N	G	I	T	L	I	G	K	K	F	S	D	Y	A	L	L	D	L	A	K	R	F	F	S	V	A	F	P	N	N	S	R	T	Y	G	K	F	V	D	R	R	I	T	V	E	D	E	L	D	G	P	S	K	D	T	L	N	G	V	K	L	A	V	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S											T	T																	S	T	T	T				B	T	T	B	T	T				S	S	T	T					S		G	G	G										S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	H	L	K	G	L	P	L	H	W	Q	L	Q	K	C	N	A	T	Y	L	S	S	P	K	T	S	N	N	Y	K	L	Y	A	L	P	K	V	G	P	V	L	K	P	G	L	R	R	V	N	D	G	T	G	S	Q	I	Q	L	E	V	Y	S	V	P	Y	D	R	F	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	T	T	S	T	T							T	T								B	B		T	T										S	S	S										S	S			B			B								G	G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.
Sequence	F	I	A	X	V	P	E	P	L	G	I	G	S	V	E	L	E	S	G	E	W	V	K	S	F	I	C	E	E	F	G	Y	T	Q	Q	G	T	V	D	I	T	K	F	G	G	F	K	P	Y	I	E	H	I	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T			T	T								B	T	T	S										T	T	G	G	G	S	T	T					G	G	G	S	S							T	T

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PDB structure

FASTA sequence

Hidden Markov model

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