PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4is2A_

Fold library id	PDB Header	Molecule	Title
c4is2A_	PDB header: oxidoreductase	Chain: A: PDB Molecule: bile acid 3-alpha hydroxysteroid dehydrogenase;	PDBTitle: crystal structure of the apo form of a 3alpha-hydroxysteroid2 dehydrogenase (baia2) associated with secondary bile acid synthesis3 from clostridium scindens vpi12708 at 1.90 a resolution

Links to external resources
Added to library: Sat Apr 13 08:52:33 2013

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence X N L V Q D K V T I I T G G T R G I G F A A A K I F I D N G A K V S I F G E T Q E E V D T A L A Q L K E L Y P E E E V L G F A P D L T S R D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
T T T T S T T
S S
T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A V X A A V G Q V A Q K Y G R L D V X I N N A G I T S N N V F S R V S E E E F K H I X D I N V T G V F N G A W C A Y Q C X K D A K K G V I I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
G G G
T T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence N T A S V T G I F P A S K A S V I G L T H G L G R E I I R K N I R V V G V A P G V V N T X L E P E E I A N V Y L F L A S D L A S G I T A T T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
-
S G G G T
B
B
S G G G T T
S

. . . . .

Sequence V S V D G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
-

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	N	L	V	Q	D	K	V	T	I	I	T	G	G	T	R	G	I	G	F	A	A	A	K	I	F	I	D	N	G	A	K	V	S	I	F	G	E	T	Q	E	E	V	D	T	A	L	A	Q	L	K	E	L	Y	P	E	E	E	V	L	G	F	A	P	D	L	T	S	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	T						T	T	T	T	S													T	T								S	S																T	T										T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	V	X	A	A	V	G	Q	V	A	Q	K	Y	G	R	L	D	V	X	I	N	N	A	G	I	T	S	N	N	V	F	S	R	V	S	E	E	E	F	K	H	I	X	D	I	N	V	T	G	V	F	N	G	A	W	C	A	Y	Q	C	X	K	D	A	K	K	G	V	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S														S	S		G	G	G														T															T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	T	A	S	V	T	G	I	F	P	A	S	K	A	S	V	I	G	L	T	H	G	L	G	R	E	I	I	R	K	N	I	R	V	V	G	V	A	P	G	V	V	N	T	X	L	E	P	E	E	I	A	N	V	Y	L	F	L	A	S	D	L	A	S	G	I	T	A	T	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S			-																	S	G	G	G	T											B				B														S	G	G	G	T	T			S
	.	.	.	.	.
Sequence	V	S	V	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					-