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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ir1A_

Fold library idPDB HeaderMoleculeTitle
c4ir1A_PDB header: transferase/dnaChain: A: PDB Molecule: dna polymerase iv;PDBTitle: polymerase-dna complex


Added to library: Sat Apr 13 08:30:36 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GSRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTGMALKLCPHL
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Known secondary structure (DSSP)



TT
GGGTTS


TTTT
B
TTT

TT
B
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFNELQLTAS
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Known secondary structure (DSSP)


TT
S

SSS
TT

SSTT



 .........150.........160.........170.........180.........190.........200.........210
Sequence AGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLV
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Known secondary structure (DSSP) SST
SS


TTTS
BGGGSTT

TTT

BS
 .........220.........230.........240.........250.........260.........270.........280
Sequence MLLKRFGKFGRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKP
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Known secondary structure (DSSP) TTT






S







T
 .........290.........300.........310.........320.........330.........340..
Sequence DLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGLHVTLLDP
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Known secondary structure (DSSP) T
B
STTS

SB


TT






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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