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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4imiA_

Fold library idPDB HeaderMoleculeTitle
c4imiA_PDB header: hydrolaseChain: A: PDB Molecule: symplekin;PDBTitle: novel modifications on c-terminal domain of rna polymerase ii can2 fine- tune the phosphatase activity of ssu72.


Added to library: Sat Aug 10 08:31:59 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MTDEKTATARAKVVDWCNELVIASPSTKCELLAKVQETVLGSCAELAEEFLESVLSLAHDSNMEVRKQVV
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Known secondary structure (DSSP)


STT

TTTTGGGGGGGGGGS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence AFVEQVCKVKVELLPHVINVVSMLLRDNSAQVIKRVIQACGSIYKNGLQYLCSLMEPGDSAEQAWNILSL
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Known secondary structure (DSSP)
GGGGGGTTT
S

SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence IKAQILDMIDNENDGIRTNAIKFLEGVVVLQSFADEDSLKRDGDFSLADVPDHCTLFRREKLQEEGNNIL
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Known secondary structure (DSSP) GGG
S
TS


TTS


TT


GGGS
TT

S

 .........220.........230.........240.........250.........260.........270.........280
Sequence DILLQFHGTTHISSVNLIACTSSLCTIAKMRPIFMGAVVEAFKQLNANLPPTLTDSQVSSVRKSLKMQLQ
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Known secondary structure (DSSP) T
SS


GGGS

TT

 .........290.........300.........310.........320.........330..
Sequence TLLKNRGAFEFASTIRGMLVDLGSSTNEIQKLIPKMDKQEMARRQKRILENA
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Known secondary structure (DSSP) TSGGGGGGTT

TTS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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