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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4im6A_

Fold library idPDB HeaderMoleculeTitle
c4im6A_PDB header: structural proteinChain: A: PDB Molecule: nacht, lrr and pyd domains-containing protein 1;PDBTitle: lrr domain from human nlrp1


Added to library: Sat Jan 11 09:33:06 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VTDAYWQILFSVLKVTRNLKELDLSGNSLSHSAVKSLCKTLRRPRCLLETLRLAGCGLTAEDCKDLAFGL
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Known secondary structure (DSSP)

TT

S


TTS


STT


S
TTS


 .........80.........90.........100.........110.........120.........130.........140
Sequence RANQTLTELDLSFNVLTDAGAKHLCQRLRQPSKLQRLQLVSCGLTSDCCQDLASVLSASPSLKELDLQQN
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Known secondary structure (DSSP) S
SS



SS

TS





TTS

BGGG
SS



SS
 .........150.........160.........170.........180.........190.......
Sequence NLDDVGVRLLCEGLRHPACKLIRLGLDQTTLSDEMRQELRALEQEKPQLLIFSRRKP
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Known secondary structure (DSSP) B
TSTT






TTS

TT

SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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