PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4iloA_

Fold library id	PDB Header	Molecule	Title
c4iloA_	PDB header: unknown function	Chain: A: PDB Molecule: ct398;	PDBTitle: 2.12a resolution structure of ct398 from chlamydia trachomatis

Links to external resources
Added to library: Sat Jan 11 11:20:10 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S N A M H D A L Q S I L A I Q E L D I K M I R L M R V K K E H Q N E L A K I Q A L K T D I R R K V E E K E Q E M E K L K D Q I K G G E K R I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q E I S D Q I N K L E N Q Q A A V K K M D E F N A L T Q E M T A A N K E R R T L E H Q L S D L M D K Q A G S E D L L I S L K E S L S S T E N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S S S A I E E E I R E N I R K I N E E G R S L L S Q R T Q L K E T T D P E L F S V Y E R L L N N K K D R V V V P I E N R V C S G C H I A L T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S
T T T T T
B

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . .

Sequence P Q H E N L V R K Q D H L V F C E H C S R I L Y W Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	N	A	M	H	D	A	L	Q	S	I	L	A	I	Q	E	L	D	I	K	M	I	R	L	M	R	V	K	K	E	H	Q	N	E	L	A	K	I	Q	A	L	K	T	D	I	R	R	K	V	E	E	K	E	Q	E	M	E	K	L	K	D	Q	I	K	G	G	E	K	R	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	E	I	S	D	Q	I	N	K	L	E	N	Q	Q	A	A	V	K	K	M	D	E	F	N	A	L	T	Q	E	M	T	A	A	N	K	E	R	R	T	L	E	H	Q	L	S	D	L	M	D	K	Q	A	G	S	E	D	L	L	I	S	L	K	E	S	L	S	S	T	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	S	S	A	I	E	E	E	I	R	E	N	I	R	K	I	N	E	E	G	R	S	L	L	S	Q	R	T	Q	L	K	E	T	T	D	P	E	L	F	S	V	Y	E	R	L	L	N	N	K	K	D	R	V	V	V	P	I	E	N	R	V	C	S	G	C	H	I	A	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																T	T	S																S	S								T	T			T	T	T			B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Sequence	P	Q	H	E	N	L	V	R	K	Q	D	H	L	V	F	C	E	H	C	S	R	I	L	Y	W	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S					T	T	T