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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ilkB_

Fold library idPDB HeaderMoleculeTitle
c4ilkB_PDB header: oxidoreductaseChain: B: PDB Molecule: starvation sensing protein rspb;PDBTitle: crystal structure of short chain alcohol dehydrogenase (rspb) from e.2 coli cft073 (efi target efi-506413) complexed with cofactor nadh


Added to library: Mon Feb 4 15:25:04 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GSHMKSILIEKPNQLSIIEREIPTPSAGEVRVKVKLAGICGSDSHIYRGHNKYPRVIGHEFFGVIDAVGE
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Known secondary structure (DSSP)

TT




TT

TT



S

S
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence GVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLGVHADGGFSEYAVVPAKNAWKIPEAVADQYA
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Known secondary structure (DSSP) TS
GGGTT




SSSTT
GGG
TT
BTTTB

SSBSGGG

TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VMIEPFTIAANVTGHGQPTENDTVLVYGAGPIGLTIVQVLKGVYNVKNVIVADRIDERLEKAKESGADWA
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Known secondary structure (DSSP) TT


TT


STT

SS
T
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence INNSQTPLGESFAEKGIKPTLIIDAACHPSILKEAVTLASPAARIVLMGFSSEPSEVIQQGITGKELSIF
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Known secondary structure (DSSP)
SSS
T


SSS

TTS
TT




SS




TTT
 .........290.........300.........310.........320.........330.......
Sequence SSRLNANKFPVVIDWLSKGLIKPEKLITHTFDFQHVADAISLFELDQKHCCKVLLTF
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Known secondary structure (DSSP)

S
SS
T
S
GGGTGGG

SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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