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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ikyA_

Fold library idPDB HeaderMoleculeTitle
c4ikyA_PDB header: transport proteinChain: A: PDB Molecule: di-tripeptide abc transporter (permease);PDBTitle: crystal structure of peptide transporter pot (e310q mutant) in complex2 with sulfate


Added to library: Sat Jul 13 09:59:42 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SIDKQQIAASVPQRGFFGHPKGLFTLFFTEFWERFSYYGMRAILVYYMYYEVSKGGLGLDEHLALAIMSI
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Known secondary structure (DSSP)


S


TTTS
GGGTS



 .........80.........90.........100.........110.........120.........130.........140
Sequence YGALVYMSGIIGGWLADRVFGTSRAVFYGGLLIMAGHIALAIPGGVAALFVSMALIVLGTGLLKPNVSSI
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Known secondary structure (DSSP) TT
SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence VGDMYKPGDDRRDAGFSIFYMGINLGAFLAPLVVGTAGMKYNFHLGFGLAAVGMFLGLVVFVATRKKNLG
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Known secondary structure (DSSP) S
TT
TTT
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence LAGTYVPNPLTPAEKKKAAAIMAVGAVVIAVLLAILIPNGWFTVETFISLVGILGIIIPIIYFVVMYRSP
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Known secondary structure (DSSP) TTT
S
SS


T



T
 .........290.........300.........310.........320.........330.........340.........350
Sequence KTTAEERSRVIAYIPLFVASAMFWAIQQQGSTILANYADKRTQLDVAGIHLSPAWFQSLNPLFIIILAPV
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Known secondary structure (DSSP) T

TTTTTB

TT

GGGGGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence FAWMWVKLGKRQPTIPQKFALGLLFAGLSFIVILVPGHLSGGGLVHPIWLVLSYFIVVLGELCLSPVGLS
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Known secondary structure (DSSP) GGGS

SSSS
B
TGGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence ATTKLAPAAFSAQTMSLWFLSNAAAQAINAQLVRFYTPENETAYFGTIGGAALVLGLILLAIAPRIGRLM
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Known secondary structure (DSSP) S
GGGGGGTTSGGG

SSSS
 ..
Sequence KG
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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