Fold library entry viewer: c4iidB_

Added to library: Sat Apr 13 08:47:22 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	A	F	S	P	P	F	Y	P	S	P	W	A	N	G	Q	G	E	W	A	E	A	Y	Q	R	A	V	A	I	V	S	Q	M	T	L	D	E	K	V	N	L	T	T	G	T	G	W	E	L	E	K	C	V	G	Q	T	G	G	V	P	R	L	N	I	G	G	M	C	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S								G	G	G												T	T											B	B			T	T	S	S	S	S	S			B			B	G	G	G	T	B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	S	P	L	G	I	R	D	S	D	Y	N	S	A	F	P	A	G	V	N	V	A	A	T	W	D	K	N	L	A	Y	L	R	G	Q	A	M	G	Q	E	F	S	D	K	G	I	D	V	Q	L	G	P	A	A	G	P	L	G	R	S	P	D	G	G	R	N	W	E	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S		S	S		S	S														T																			T	T		S						B			S			S	S	T	T		T	T	G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	P	D	P	A	L	T	G	V	L	F	A	E	T	I	K	G	I	Q	D	A	G	V	V	A	T	A	K	H	Y	I	L	N	E	Q	E	H	F	R	Q	V	A	E	A	A	G	Y	G	F	N	I	S	D	T	I	S	S	N	V	D	D	K	T	I	H	E	M	Y	L	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S																		T	T									T	T				S	T	T	S	S							T	T				S	S														T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	P	F	A	D	A	V	R	A	G	V	G	A	I	M	C	S	Y	N	Q	I	N	N	S	Y	G	C	Q	N	S	Y	T	L	N	K	L	L	K	A	E	L	G	F	Q	G	F	V	M	S	D	W	G	A	H	H	S	G	V	G	S	A	L	A	G	L	D	M	S	M	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T								S	S			T	T			G	G	G													S				S						T	T					S						T	T			B	B	S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	I	T	F	D	S	A	T	S	F	W	G	T	N	L	T	I	A	V	L	N	G	T	V	P	Q	W	R	V	D	D	M	A	V	R	I	M	A	A	Y	Y	K	V	G	R	D	R	L	Y	Q	P	P	N	F	S	S	W	T	R	D	E	Y	G	F	K	Y	F	Y	P	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	T	T		S			S	S	T									T	T	S	S																			T	T										S		S	S				S						T	T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	G	P	Y	E	K	V	N	H	F	V	N	V	Q	R	N	H	S	E	V	I	R	K	L	G	A	D	S	T	V	L	L	K	N	N	N	A	L	P	L	T	G	K	E	R	K	V	A	I	L	G	E	D	A	G	S	N	S	Y	G	A	N	G	C	S	D	R	G	C	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	T										T	T							S	S			S			S			S							G	G	G	S			T	T		T	T		S	G	G	G		S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	N	G	T	L	A	M	A	W	G	S	G	T	A	E	F	P	Y	L	V	T	P	E	Q	A	I	Q	A	E	V	L	K	H	K	G	S	V	Y	A	I	T	D	N	W	A	L	S	Q	V	E	T	L	A	K	Q	A	S	V	S	L	V	F	V	N	S	D	A	G	E	G	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S					B	S	S	S					S																T	T									T	T													S											B		T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	I	S	V	D	G	N	E	G	D	R	N	N	L	T	L	W	K	N	G	D	N	L	I	K	A	A	A	N	N	C	N	N	T	I	V	V	I	H	S	V	G	P	V	L	V	D	E	W	Y	D	H	P	N	V	T	A	I	L	W	A	G	L	P	G	Q	E	S	G	N	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T			S	S		S		S	S		S	T	T													S									S	S					T	T	T	T	T		T	T												T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	A	D	V	L	Y	G	R	V	N	P	G	A	K	S	P	F	T	W	G	K	T	R	E	A	Y	G	D	Y	L	V	R	E	L	N	N	G	N	G	A	P	Q	D	D	F	S	E	G	V	F	I	D	Y	R	G	F	D	K	R	N	E	T	P	I	Y	E	F	G	H	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S	S							S	S		B		S	S	S	G	G	G							S		S	S	T	T	S							T	T	T	T			T							T	T				S	B		T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	S	Y	T	T	F	N	Y	S	G	L	H	I	Q	V	L	N	A	T	E	T	G	A	A	P	T	F	G	Q	V	G	N	A	S	D	Y	V	Y	P	E	G	L	T	R	I	S	K	F	I	Y	P	W	L	N	S	T	D	L	K	A	S	S	G	D	P	Y	Y	G	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B		S	S																B								S					G	G	G	G	B			T	T					T	T				S		B	S	S	S									T	T	T	T	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	T	A	E	H	V	P	E	G	A	T	D	G	S	P	Q	P	V	L	P	A	G	G	G	S	G	G	N	P	R	L	Y	D	E	L	I	R	V	S	V	T	V	K	N	T	G	R	V	A	G	D	A	V	P	Q	L	Y	V	S	L	G	G	P	N	E	P	K	V	V	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	G	G	G	S		T	T	T	T			S			B			T	T		S	S	T	T	S		G	G	G	G														S	S	S														S	T	T	S		S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.
Sequence	K	F	D	R	L	T	L	K	P	S	E	E	T	V	W	T	T	T	L	T	R	R	D	L	S	N	W	D	V	A	A	Q	D	W	V	I	T	S	Y	P	K	K	V	H	V	G	S	S	S	R	Q	L	P	L	H	A	A	L	P	K	V	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T											T	G	G	G					T	T	T	T						S	S								S	S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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