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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4iglA_

Fold library idPDB HeaderMoleculeTitle
c4iglA_PDB header: toxinChain: A: PDB Molecule: yenb;PDBTitle: structure of the rhs-repeat containing bc component of the secreted2 abc toxin complex from yersinia entomophaga


Added to library: Sat Aug 10 08:51:36 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EMAITTLSLPKGGGAINGMGESVGQAGPDGMVTFSIPLPFSAGRGVAPALSLSYSSGAGNGPFGMGWQCS
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S





TT







TTS




TT



TTSTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence AMSISRRTQKGVPQYNEDDEFLSPSGEVMAIALNDSGFEDVRTANRLQGIPLPFSYKVTRYQPRLIQDFI
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Known secondary structure (DSSP)

B

TTS


SSTT

BB
TTS
B
B
TTSSB
TTSSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence KIEYWQPVKQTDGTPFWIIYSPDGQTHILGKNSHSRVANAENPSQIASWLLEETVTPTGEHIYYQYSGEN
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Known secondary structure (DSSP) SSGGG



TBS
S
SGGG
SS
TTS
TTS


 .........220.........230.........240.........250.........260.........270.........280
Sequence QVNCTDAEIALHPQDSAQRYLARIDYGNISPQASLFVLDEELPNLTQWLFHLVFDYGERDISINKIPTFE
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Known secondary structure (DSSP)
TT


S




SS

SS
GGGSSS


GGGSSSS


TTS


SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence GGTTGWLARPDMFSRYDFGIEIRNRRLCHQVLGFHRLEALNDRDVTDEIPVLVNRLTLDYDLNNSVSTLV
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Known secondary structure (DSSP)

SS




SS

TTSS






TT


TT




SS

 .........360.........370.........380.........390.........400.........410.........420
Sequence AVRQVAYETDGSPITQPPLEFDYQRFDTGSIPGWQEMPQLEAFNGYQPYQMIDLYGEGTPGILYQETPGA
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Known secondary structure (DSSP)
TT








GGG



GGGTTS
SS


SS
SSS
SSSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence WWYKSPQRQIGGDSNAVTYGAMKALPKIPRLEGATLMDINGDGRLDWVITSAGVRGFHSIEWTHFTPLNT
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Known secondary structure (DSSP)

SSS
TT














S
SS






SS




GGG
 .........500.........510.........520.........530.........540.........550.........560
Sequence LPTEYFHPKAQLADLVGAGLSDLVLIGPKSVRLYANQNVSLPVIGSRQLVAFADMLGSGQQHLVEITADS
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Known secondary structure (DSSP) S
TTSSS

TT

S
STT















SSSSSS

SS
 .........570.........580.........590.........600.........610.........620.........630
Sequence VKCWPNMGHGRFGQPLTLEGFSQPQTSFNPDRVFLADIDGSGTNDIIYAHSECLEIYLNESGNRFSKPIS
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Known secondary structure (DSSP)
TT



BT



TTT

GGG
SSSSSS

SS
TTT
S
 .........640.........650.........660.........670.........680.........690.........700
Sequence LLLPDGVNFDNTCQLQAADIQGLGIASLVMTVPHMSPTHWRCDLALNKPWLLNVMNNNRGAETCLFYRSS
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Known secondary structure (DSSP)

TT



TTS
TTSSSS

SSSSS

S
SS
TT

SSS
 .........710.........720.........730.........740.........750.........760.........770
Sequence AQFWLDEKQLVEAAGQQPECHLPFPMHLHWRSEIFDEITGNRLTQEQEYAHGSWDGQEREFRGFGRLIQR
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Known secondary structure (DSSP) TT




B

S

TTT

TTTT
 .........780.........790.........800.........810.........820.........830.........840
Sequence DTDGFAQGTVDIPTHPSRTVSWFATGIPEIDTTLSAEFWRGDDQAFSPFSPRFTRWEDSEAGSDVAFIPS
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Known secondary structure (DSSP)
TT
SSSS





S
TTTGGGS



TTS








SS





 .........850.........860.........870.........880.........890.........900.........910
Sequence EHDAFWLNRAMKGQLLRSELYGDDGTPEAEIPYSVTEMRHQVRALPTTDATVPSAWCSTIETRSYQYQRV
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Known secondary structure (DSSP) TTTT

SS
GGGGS
S

S
SS


TT
 .........920.........930.........940.........950.........960.........970.........980
Sequence AADPQCSQQVVIKADRYGSPLLSVAINYPRRKKPEKSPYPDDLPETLFDSSYDTQQQQLHLTKQQQNYFH
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Known secondary structure (DSSP) TTS

TTS







SS
SS
TTS
TTT

GGGG
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence LTNDDNWLLGLPKEQRNDGYQYDQERAPANGFTLETLIASNSLIGSNQPFTYLGQSRVAYQGGVDEQPSL
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Known secondary structure (DSSP)
STT

GGGS
TT


STT
TTSTTS

SSSSTT


T
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence QALVAYGETAILDEKTLQAFVGVLDSKTRDELLFSAGYQLAPRLFRVESEPDVWVARQGYSEFGDYSQFW
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Known secondary structure (DSSP) T


TTGGGGGTTT

TT


TT

TT





GGGTT
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence RPLSQRSTLLTGKTTLKWDKHYCVVIETQDAAQLVTQARYDYRFLTPYSLTDANDNQHYVVLNPFGEVIA
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Known secondary structure (DSSP)
S
TTS


TTSSS
TT

TTTT
TTS

TTS
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence SRFWGTEAGKDAGYSTPQAKPFVVPATIEAALALSPGIPVAHCAIFEPESWMQKLTQHDVSERMADNGTL
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Known secondary structure (DSSP) TTS

TTTS




SST

S

S
STTTTS
B

TSTT
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence WNALLQARFVTEDGYVCALGRRRWMARHGLSVLMLTLLAEIPRTPPHSLTITTDRYDSDDQQQLRQRILF
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Known secondary structure (DSSP) TTSB
TTSBB



S



SSS
TT
TT

 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence SDGFGRLLQSAQRVEAGESWQRSEDSSLVVNVSGTPALVVTDNRWAVSGRTEYDGKGQGIRVYQPYFLDD
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Known secondary structure (DSSP)
TTS


S
B
TTSSB
B
TTS
B
SS



TTS


S
 .........1410.........1420.........1430.........1440.........1450.......
Sequence WRYLSDDSARTDLFADTHIYDPLGREYQVITAKGYRRERQYTPWFVVNQDENDTAAN
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Known secondary structure (DSSP) SS


S

TTS

TTS

SS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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