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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ifdI_

Fold library idPDB HeaderMoleculeTitle
c4ifdI_PDB header: hydrolase/rnaChain: I: PDB Molecule: exosome complex component csl4;PDBTitle: crystal structure of an 11-subunit eukaryotic exosome complex bound to2 rna


Added to library: Sat Feb 9 15:38:47 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MACNFQFPEIAYPGKLICPQYGTENKDGEDIIFNYVPGPGTKLIQYEHNGRTLEAITATLVGTVRCEEEK
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Known secondary structure (DSSP)



TTS
S
TT
STT
TTTT
SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence KTRRTVKNILVSVLPGNDFANNLPKEGDIVLTRVTRLSLQRANVEILAVEDKPAATFSVSQASSDLGETF
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STT


TT

SS







S
TTTT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence RGIIRSQDVRSTDRDRVKVIECFKPGDIVRAQVLSLGDGTNYYLTTARNDLGVVFARAANGAGGLMYATD
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Known secondary structure (DSSP) GGGS
SS

SS

GGGT

TT


SSS

STT
TTTTTS
SS
 .........220.........230
Sequence WQMMTSPVTGATEKRKCAKP
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Known secondary structure (DSSP) SS
TTT



B



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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