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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ifdH_

Fold library idPDB HeaderMoleculeTitle
c4ifdH_PDB header: hydrolase/rnaChain: H: PDB Molecule: exosome complex component rrp4;PDBTitle: crystal structure of an 11-subunit eukaryotic exosome complex bound to2 rna


Added to library: Sat Feb 9 15:41:29 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SEVITITKRNGAFQNSSDSQIVTPGELVTDDPIWMRGHGTYFLDNMTYSSVAGTVSRVNRLLSVIPLKGR
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Known secondary structure (DSSP)

S






S
SS






TT


TTS
TTTTSSSTTSS

 .........80.........90.........100.........110.........120.........130.........140
Sequence YAPETGDHVVGRIAEVGNKRWKVDIGGKQHAVLMLGSVNLPGGILRRKSESDELQMRSFLKEGDLLNAEV
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TT
TT
SSSS
GGGS

TTGGG



TTTTT
GGGTS
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QSLFQDGSASLHTRSLKYGKLRNGMFCQVPSSLIVRAKNHTHNLPGNITVVLGVNGYIWLRKTSQMDLAR
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Known secondary structure (DSSP)
SSS


SSSS

S

GGG



S

TTT
TTS

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence DTESSWQIYSDENDPSISNNIRQAICRYANVIKALAFCEIGITQQRIVSAYEASMVYSNVGELIEKNVME
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Known secondary structure (DSSP)


GGGSSS




S


TT



GGGSSSGGGGGS
 .........290.....
Sequence SIGSDILTAEKMRGN
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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