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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ifdG_

Fold library idPDB HeaderMoleculeTitle
c4ifdG_PDB header: hydrolase/rnaChain: G: PDB Molecule: exosome complex component rrp40;PDBTitle: crystal structure of an 11-subunit eukaryotic exosome complex bound to2 rna


Added to library: Sat Feb 9 15:40:33 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MSTFIFPGDSFPVDPTTPVKLGPGIYCDPNTQEIRPVNTGVLHVSAKGKSGVQTAYIDYSSKRYIPSVND
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TT


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SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FVIGVIIGTFSDSYKVSLQNFSSSVSLSYMAFPNASKKNRPTLQVGDLVYARVCTAEKELEAEIECFDST
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SSSSTTS

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TT


TTS

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 .........150.........160.........170.........180.........190.........200.........210
Sequence TGRDAGFGILEDGMIIDVNLNFARQLLFNNDFPLLKVLAAHTKFEVAIGLNGKIWVKCEELSNTLACYRT
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Known secondary structure (DSSP) T
S
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S



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SS
 .........220.........230......
Sequence IMECCQKNDTAAFKDIAKRQFKEILT
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Known secondary structure (DSSP)

STT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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