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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4idhA_

Fold library idPDB HeaderMoleculeTitle
c4idhA_PDB header: viral proteinChain: A: PDB Molecule: gene 2 protein;PDBTitle: crystal structure of the large terminase subunit gp2 of bacterial2 virus sf6


Added to library: Sat May 4 08:38:58 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SINPIFEPFIEAHRYKVAKGGRGSGKSWAIARLLVEAARRQPVRILCARELQNSISDSVIRLLEDTIERE
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Known secondary structure (DSSP)


GGGGGGTS

S

TT

TTS

S

SSGGGSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GYSAEFEIQRSMIRHLGTNAEFMFYGIKNNPTKIKSLEGIDICWVEEAEAVTKESWDILIPTIRKPFSEI
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Known secondary structure (DSSP) T
GGGTTTTT

TTT






SGGG

GGG

STT
 .........150.........160.........170.........180.........190.........200.........210
Sequence WVSFNPKNILDDTYQRFVVNPPDDICLLTVNYTDNPHFPEVLRLEMEECKRRNPTLYRHIWLGEPVSASD
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Known secondary structure (DSSP)


BTTSTTS

SS

GGG
TT


S


B


T
 .........220.........230.........240.........250.........260.........270.........280
Sequence MAIIKREWLEAATDAHKKLGWKAKGAVVSAHDPSDTGPDAKGYASRHGSVVKRIAEGLLMDINEGADWAT
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Known secondary structure (DSSP) TBSS
BTT



S



SSS

TT
S

 .........290.........300.........310.........320.........330.........340.........350
Sequence SLAIEDGADHYLWDGDGVGAGLRRQTTEAFSGKKITATMFKGSESPFDEDAPYQAVRTIGDVFRNKRAQF
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Known secondary structure (DSSP) TT
S
SSGGGG
TTTS


TTS

TTTTSB




BBSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence YYALADRLYLTYRAVVHGEYADPDDMLSFDKEAIGEKMLEKLFAELTQIQRKFNNNGKLELMTKVEMKQK
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Known secondary structure (DSSP)




GGG



TT
BB


TTS
B
B

 .........430.........440.........450.
Sequence LGIPSPNLADALMMCMHCPALVREETEIYVP
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Known secondary structure (DSSP)




TT



B

TTS

B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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