Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4idgB_

Fold library idPDB HeaderMoleculeTitle
c4idgB_PDB header: oxidoreductaseChain: B: PDB Molecule: short-chain dehydrogenase/reductase;PDBTitle: crystal structure of a short-chain dehydrogenase/reductase superfamily2 protein from agrobacterium tumefaciens (target efi-506441) with bound3 nad, monoclinic form 2


Added to library: Wed Jan 9 23:20:56 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGTGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFMS
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP)
TTTSTT

SS

SS

SS
TT
TT





 .........80.........90.........100.........110.........120.........130.........140
Sequence WAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLG
Predicted secondary structure














































SS confidence





































































Known secondary structure (DSSP)

GGGTTT
SGGGTTTTS
SSSSB
TTS




S
 .........150.........160.........170.........180.........190.........200.........210
Sequence EELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEP
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP) SS



GGGTT
TTSTTBT
TS

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence SHILARNENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVTVD
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP)

TTS
B



GGGTTS
SS



 .........290.........300.........310.........320........
Sequence FPGDGVYYHTSNERIRNTLGFEAEWTMDRMLEEAATARRQRLAKEQRR
Predicted secondary structure


















SS confidence















































Known secondary structure (DSSP)
SSS

B

B








TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D