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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ic6A_

Fold library idPDB HeaderMoleculeTitle
c4ic6A_PDB header: hydrolaseChain: A: PDB Molecule: protease do-like 8, chloroplastic;PDBTitle: crystal structure of deg8


Added to library: Sat May 4 09:07:39 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PTVFPAGPLFPTEGRIVQLFEKNTYSVVNIFDVTLRPGNGSGVVWDGQGYIVTNYHVIGNALSRNPSPGD
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Known secondary structure (DSSP)









TTTT





STT

GGGGT


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence VVGRVNILASDGVQKNFEGKLVGADRAKDLAVLKVDAPETLLKPIKVGQSNSLKVGQQCLAIGNPFGFDH
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Known secondary structure (DSSP)
TTS
TTTT



TTT




B

GGG

TT

SSSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence TLTVGVISGLNRDIFSQTGVTIGGGIQTDAAINPGNAGGPLLDSKGNLIGINTAIFTQTGTSAGVGFAIP
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Known secondary structure (DSSP) BTTSBSS


TTTTTSTT



B

SSS


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence SSTVLKIVPQLIQFSKVLRAGINIELAPDPVANQLNVRNGALVLQVPGKSLAEKAGLHPTSRGFAGNIVL
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Known secondary structure (DSSP) SS







TT

SS

TT
T



B

SS


B
 .........290.........300.........310.........320.........330.........340
Sequence GDIIVAVDDKPVKNKAELMKILDEYSVGDKVTLKIKRGNEDLELKISLEEKSSLEHHHHH
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Known secondary structure (DSSP)

TT

STTS
TT
TT





B




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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