Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ic5B_

Fold library idPDB HeaderMoleculeTitle
c4ic5B_PDB header: hydrolaseChain: B: PDB Molecule: protease do-like 5, chloroplastic;PDBTitle: crystal structure of deg5


Added to library: Sat May 4 08:45:47 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EELEEEEERNVNLFQKTSPSVVYIEAIELEGTGSGFVWDKLGHIVTNYHVIAKLATDQFGLQRCKVSLVD
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)

S
GGG







TT

TGGGT
TTT



 .........80.........90.........100.........110.........120.........130.........140
Sequence AKGTRFSKEGKIVGLDPDNDLAVLKIETEGRELNPVVLGTSNDLRVGQSCFAIGNPYGYENTLTIGVVSG
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP) TTS

GGGT


TT






B

STT

TT

SSSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LGREIPSPNGKSISEAIQTDADINSGNAGGPLLDSYGHTIGVNTATFVNFAIPIDTVVRTVPYLIVYGTA
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)



SS

SS

TT

S


GGGTTS
TTS





TSB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D