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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ic1D_

Fold library idPDB HeaderMoleculeTitle
c4ic1D_PDB header: structural genomics, unknown functionChain: D: PDB Molecule: uncharacterized protein;PDBTitle: crystal structure of sso0001


Added to library: Tue Jan 22 09:09:00 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YFQGXITEFLLKKKLEEHLSHVKEENTIYVTDLVRCPRRVRYESEYKELAISQVYAPSAILGDILHLGLE
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Known secondary structure (DSSP)

S




TTTS
TGGGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence SVLKGNFNAETEVETLREINVGGKVYKIKGRADAIIRNDNGKSIVIEIKTSRSDKGLPLIHHKXQLQIYL
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Known secondary structure (DSSP) T

TTS
SSS


S

TTSS
 .........150.........160.........170.........180.........190.........200......
Sequence WLFSAEKGILVYITPDRIAEYEINEPLDEATIVRLAEDTIXLQNSPRFNWECKYCIFSVICPAKLT
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Known secondary structure (DSSP) T
STT




T
SSSSSTT
TTTTT
TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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