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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4i6mA_

Fold library idPDB HeaderMoleculeTitle
c4i6mA_PDB header: transcription/hydrolaseChain: A: PDB Molecule: actin-related protein 7;PDBTitle: structure of arp7-arp9-snf2(hsa)-rtt102 subcomplex of swi/snf2 chromatin remodeler.


Added to library: Sat Feb 16 08:39:40 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TLNRKCVVIHNGSHRTVAGFSNVELPQCIIPSSYIKRTEAEFIFGTYNXIDAAAEKRNGDEVYTLVDSQG
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Known secondary structure (DSSP)

S



SSTTSSS
SS





STT
TT
SB
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LPYNWDALEXQWRYLYDTQLKVSPEELPLVITXPATNGKPDXAILERYYELAFDKLNVPVFQIVIEPLAI
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Known secondary structure (DSSP)
B

TS
S
TTTS




SSTTTTT

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence ALSXGKSSAFVIDIGASGCNVTPIIDGIVVKNAVVRSKFGGDFLDFQVHERLAPLIKEEQKRSTDVWYEA
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Known secondary structure (DSSP) TTT
SS
SS
TT
GGG

S
SGGGSS



S
 .........220.........230.........240.........250.........260.........270.........280
Sequence STWIQQFKSTXLQVSEKDLFELERYYKEQADIYAKQQENNPLVQKKNFLFKPLNKTLTLDLKECYQFAEY
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Known secondary structure (DSSP) TT



SS



GGG
GGGT
 .........290.........300.........310.........320.........330.........340.........350
Sequence LFKPQLISDKFSPEDGLGPLXAKSVKKAGASISPEQVYSLLLTNVIITGSTSLIEGXEQRIIKELSIRFP
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Known secondary structure (DSSP)
GGGT
TTS
GGGSTTTT


TTSSGGGGSTT
T
 .........360.........370.........380.........390.........
Sequence QYKLTTFANQVXXDRKIQGWLGALTXANLPSWSLGKWYSKEDYETLKRD
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Known secondary structure (DSSP) TS





STT
S
GGGS
T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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