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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4i6gA_

Fold library idPDB HeaderMoleculeTitle
c4i6gA_PDB header: transcriptionChain: A: PDB Molecule: cryptochrome-2;PDBTitle: a vertebrate cryptochrome with fad


Added to library: Sat Mar 16 08:26:55 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ASSVHWFRKGLRLHDNPALLAAVRGARCVRCVYILDPWFAASSSVGINRWRFLLQSLEDLDTSLRKLNSR
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Known secondary structure (DSSP)
SS


STT
TT
S


S
TTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence LFVVRGQPADVFPRLFKEWGVTRLTFEYDSEPFGKERDAAIMKMAKEAGVEVVTENSHTLYDLDRIIELN
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Known secondary structure (DSSP) S
TT




STTT

TTSSS
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence GQKPPLTYKRFQALISRMELPKKPAVAVSSQQMESCRAEIQENHDDTYGVPSLEELGFPTEGLGPAVWQG
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Known secondary structure (DSSP) TSS

SSTTS










TTTTTTT




TT
GGGSS


TTTTT


TT



SS

 .........220.........230.........240.........250.........260.........270.........280
Sequence GETEALARLDKHLEANSLLASPTGLSPYLRFGCLSCRLFYYRLWDLYKKVKRNSTPPLSLFGQLLWREFF
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Known secondary structure (DSSP) S


GGGS

TT

TSS
SSS



GGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence YTAATNNPRFDRMEGNPICIQIPWDRNPEALAKWAEGKTGFPWIDAIMTQLRQEGWIHHLARHAVACFLT
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Known secondary structure (DSSP) TT
TTTT
STT
TTS




B

TT
SS
S


T
 .........360.........370.........380.........390.........400.........410.........420
Sequence RGDLWVSWESGVRVFDELLLDADFSVNAGSWMWLSCSAFFQQFFHCYCPVGFGRRTDPSGDYIRRYLPKL
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Known secondary structure (DSSP) TTTT
B

TT

TTSSTT

S




TT
TT

GGG
 .........430.........440.........450.........460.........470......
Sequence KGFPSRYIYEPWNAPESVQKAAKCIIGVDYPRPIVNHAETSRLNIERMKQIYQQLS
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Known secondary structure (DSSP) TTS
T
GGGS
TT

BTTTB


SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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