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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4i43A_

Fold library idPDB HeaderMoleculeTitle
c4i43A_PDB header: splicingChain: A: PDB Molecule: a1 cistron-splicing factor aar2;PDBTitle: crystal structure of prp8:aar2 complex


Added to library: Fri Feb 1 11:47:39 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NTVPFTSAPIEVTIGIDQYSFNVKENQPFHGIKDIPIGHVHVIHFQHADNSSMRYGYWFDCRMGNFYIQY
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Known secondary structure (DSSP)

BS


S
TT
TT



S

TTS
SSTTS


GGG

 .........80.........90.........100.........110.........120.........130.........140
Sequence DPKDGLYKMMEERDGAKFENIRQMMVSYPKIDEDDTWYNLTEFVQMDKIRKIVRKDENQFSYVDSSMTTV
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Known secondary structure (DSSP) TTTT

S

TT




TT
TT

B

TT
SSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QENELLKSSLEAKNEDDPAHSLNYTVINFKSREAIRPGHEMEDFLDKSYYLNTVMLQGIFKNSSNYFGEL
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Known secondary structure (DSSP)







GGG





TTSTTTS
TT

T






SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence QFAFLNAMFFGNYGSSLQWHAMIELICSSATVPKHMLDKLDEILYYQIKTLPEQYSDILLNERVWNICLY
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Known secondary structure (DSSP)

T
S


S
GGG

 .........290.........300.........310.........320.........330....
Sequence SSFQKNSLHNTEKIMENKYPELLGKDNDDALIYGDDEDDEHNPTIVGGLYYQRP
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Known secondary structure (DSSP) TSTTTTS

TGGGT














TTS












Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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