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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4i2yB_

Fold library idPDB HeaderMoleculeTitle
c4i2yB_PDB header: fluorescent proteinChain: B: PDB Molecule: rgeco1;PDBTitle: crystal structure of the genetically encoded calcium indicator rgeco1


Added to library: Sat Jul 27 08:46:18 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RKWNKAGHAVRAIGRLSSPVVSERMYPEDGALKSEIKKGLRLKDGGHYAAEVKTTYKAKKPVQLPGAYIV
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Known secondary structure (DSSP)
S



TT

TTS

SS





S
 .........80.........90.........100.........110.........120.........130.........140
Sequence DIKLDIVSHNEDYTIVEQCERAEGRHSAIIKEFMRFKVHMEGSVNGHEFEIEGEGEGRPYEAFQTAKLKV
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Known secondary structure (DSSP)
TTSS



S
SSTTTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence TKGGPLPFAWDILSPQFSKAYIKHPADIPDYFKLSFPEGFRWERVMNFEDGGIIHVNQDSSLQDGVFIYK
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Known secondary structure (DSSP) S
S
SS
GGGTGGG

TTS
B

TTS

TTTT
TTS
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VKLRGTNFPPDGPVMQKKTMGWEATRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE
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Known secondary structure (DSSP)


TTSTTTTT


B




TT
SSB

TT



 .........290.........300.........310.........320.........330.........340.........350
Sequence AELQDMINEVDADGDGTFDFPEFLTMMARKMNDTDSEEEIREAFRVFDKDGNGYIGAAELRHVMTDLGET
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Known secondary structure (DSSP)
TT
SS

BB



TT
SS
T

 .........360.........370........
Sequence DEEVDEMIRVADIDGDGQVNYEEFVQMM
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Known secondary structure (DSSP)

SSSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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