Fold library entry viewer: c4i2wA_

Added to library: Sat Mar 16 08:38:04 2013
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	Q	T	A	E	E	I	R	D	E	G	N	A	A	V	K	D	Q	D	Y	I	K	A	D	E	L	Y	T	E	A	L	Q	L	T	T	D	E	D	K	A	L	R	P	V	L	Y	R	N	R	A	X	A	R	L	K	R	D	D	F	E	G	A	Q	S	D	C	T	K	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T																S		T	T	S	G	G	G	T														T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	F	D	G	A	D	V	K	A	L	F	R	R	S	L	A	R	E	Q	L	G	N	V	G	P	A	F	Q	D	A	K	E	A	L	R	L	S	P	N	D	K	G	I	V	E	V	L	Q	R	L	V	K	A	N	N	D	K	I	K	Q	T	T	S	L	A	N	K	V	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T		S														G	G	G	T														T	T	S	S																		T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	X	E	K	L	A	F	R	G	E	A	K	D	T	E	Q	K	X	T	A	L	N	N	L	L	V	L	C	R	E	S	E	S	G	A	T	G	V	W	N	Q	G	A	L	V	P	F	V	L	N	L	I	N	D	A	S	E	N	E	E	V	T	V	T	A	I	R	I	L	D	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S	S				S																	S	S									G	G	G	T												S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	I	K	N	S	V	R	C	X	K	F	L	A	X	H	D	P	D	G	P	K	S	V	R	F	V	C	R	L	X	C	K	K	S	T	K	D	F	V	D	A	T	G	I	L	V	Q	R	V	F	N	A	X	A	K	X	D	R	Q	K	E	X	K	P	D	P	E	V	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S										T	T		S	S										T					S		S																			T	T		B	T	T	T	T	B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	N	K	I	W	I	I	R	V	L	L	E	L	Q	E	X	L	Q	D	P	K	V	G	A	V	Q	R	E	T	C	I	D	L	F	L	K	N	L	X	H	X	D	G	G	I	P	R	G	W	S	W	K	F	V	E	E	R	G	L	L	A	L	L	D	V	A	S	Q	I	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T														T	T	T		T	T	S																		T	T	T	T		S		T	T							S	S											T		B	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	E	L	C	E	Y	P	V	S	A	E	T	R	Q	H	V	A	I	C	L	Q	R	L	E	E	D	X	V	F	D	T	K	R	T	I	F	K	E	K	V	D	X	F	F	N	A	L	I	S	R	C	T	N	D	D	E	G	H	K	Y	R	I	K	L	S	C	F	L	I	T	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	B		S	S				T	T															T	T																						T	T			S	S	T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	Q	G	P	V	D	I	G	I	N	L	I	T	N	D	Q	L	T	P	I	X	L	E	X	A	A	S	Q	D	H	L	X	Q	G	I	A	A	E	L	I	V	A	T	V	S	K	H	E	R	A	I	N	X	L	K	V	G	I	P	V	L	R	A	L	Y	D	S	E	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S									T	S	T	T											S	S							T	T	T	T	T	T	T	T	T			S		S	S	S																		S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	V	K	V	R	A	L	V	G	L	C	K	I	G	A	E	E	A	V	I	S	L	A	K	T	C	K	K	F	L	L	E	T	E	K	Y	S	V	D	I	R	R	Y	A	C	E	G	L	S	Y	L	S	L	D	A	D	V	K	E	W	I	V	D	D	S	L	L	L	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S	S	S							T	T														S	S	S															T		S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	V	L	L	A	K	K	A	G	A	L	C	V	Y	T	L	A	T	I	Y	A	N	L	S	N	A	F	E	K	P	K	F	A	K	H	H	V	P	E	T	H	P	K	D	T	E	E	Y	V	E	K	R	V	R	A	L	V	E	E	G	A	V	P	A	C	V	A	V	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									G	G	G	S											T	T	T												S	T	T		T	T	T	T	S	S	T	T											S	S	S	S						T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	T	E	S	K	N	A	L	E	L	I	A	R	S	L	L	A	F	A	E	Y	E	D	L	R	G	R	I	I	A	E	G	G	T	V	L	C	L	R	L	T	K	E	A	S	G	E	G	K	I	K	A	G	H	A	I	A	K	L	G	A	K	A	D	P	X	I	S	F	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S												T	T	S	S	S	S	T	T	T	T	T	T	T	T	S	S												S	T	T												T	T	S	S	S	S		G	G	G	T	S	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	Q	R	A	Y	E	V	V	K	P	L	C	D	L	L	H	P	D	V	E	G	K	A	N	Y	D	S	L	L	T	L	T	N	L	A	S	V	S	D	S	I	R	G	R	I	L	K	E	K	A	I	P	K	I	E	E	F	W	F	X	T	D	H	E	H	L	R	A	A	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T					T	T	S	G	G	G	T	S	S	S			S	S		T	T	T	T	T	T								S	S	S											T	T						T	T	S	S	S		S	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	E	L	L	L	N	L	L	F	F	E	K	F	Y	E	E	T	V	A	P	G	T	D	R	L	K	L	W	V	L	Y	S	A	E	V	E	E	E	R	L	S	R	A	S	A	A	G	F	A	I	L	T	E	D	E	N	A	C	A	R	I	X	D	E	I	K	S	W	P	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S	S	S	S	S	S	S	T	T	T	S	S	S		S	S													S	S	S	T														S	S							T	G	G	G		T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.
Sequence	F	K	D	I	A	X	H	E	D	A	E	T	Q	R	R	G	L	X	G	I	A	N	I	X	H	S	S	N	K	L	C	S	E	I	V	S	S	E	V	F	R	V	L	V	A	V	T	K	L	G	T	I	N	Q	E	R	A	G	S	T	E	Q	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	T	T									T					S	S		S							S	S										S			S		G	G	G									T	T

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PDB structure

FASTA sequence

Hidden Markov model

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