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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4hr6C_

Fold library idPDB HeaderMoleculeTitle
c4hr6C_PDB header: sugar binding proteinChain: C: PDB Molecule: lectin;PDBTitle: crystal structure of snake gourd (trichosanthes anguina) seed lectin,2 a three chain homologue of type ii rips


Added to library: Sat Aug 10 08:33:54 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NECIVETRTTRISGRDALCVDVAGALTSDGSRLILYPCGQQVNQKWTFHSDGTVRSLGKCLATNNSKFGN
Predicted secondary structure






































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Known secondary structure (DSSP)

S




GGG
GGG

STT
B


S
GGG
TTS
TT

TTTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LVVIYDCSKLAAEDISWDVSVGGTIMNPNYEDLALTSNKATRSTNLTMEVNTYSASQGWRVGNYVQPIIG
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Known secondary structure (DSSP) B

TTTS
GGGS


TTS

TTSTT
SS
STT
B




GGG

SS

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence SIVGLDDMCLEATDGNTNMWLEECVPNKREQSWALYSDGTIRVDDNRELCVTASSSTYDNWKVITILNCD
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Known secondary structure (DSSP)
GGGTTTT

TT
GGG

TTS
TTTT

 .........220.........230.........240.........250.........260....
Sequence GSNNQRWVFLADGSISTPGNQRLAMDVARSDVDLKKIILHRPHGDLNQQWVLFY
Predicted secondary structure



























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Known secondary structure (DSSP) S
TTS


TTS

SSSS

GGG
GGG






GGG



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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