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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4hp8A_

Fold library idPDB HeaderMoleculeTitle
c4hp8A_PDB header: oxidoreductaseChain: A: PDB Molecule: 2-deoxy-d-gluconate 3-dehydrogenase;PDBTitle: crystal structure of a putative 2-deoxy-d-gluconate 3-dehydrogenase2 from agrobacterium tumefaciens (target efi-506435) with bound nadp


Added to library: Thu Jan 10 02:24:25 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAK
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Known secondary structure (DSSP)
TT

TT
TTTTSTT
SS

TT



TTSTTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLS
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Known secondary structure (DSSP) TSSTTT











GGG

TT



GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence FQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRW
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Known secondary structure (DSSP) TS

SS
GGGT
SB
SGGGTSTT
TTSS
 .........220.........230.........240.....
Sequence GHSEDIAGAAVFLSSAAADYVHGAILNVDGGWLAR
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Known secondary structure (DSSP) B
TTSGGGTT

S
STTGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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