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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4hlqE_

Fold library idPDB HeaderMoleculeTitle
c4hlqE_PDB header: hydrolase activator/protein transportChain: E: PDB Molecule: tbc1 domain family member 20;PDBTitle: crystal structure of human rab1b bound to gdp and bef3 in complex with2 the gap domain of tbc1d20 from homo sapiens


Added to library: Tue Jan 22 09:06:18 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FNAKRKKKVAEIHQALNSDPTDVAALRRMAISEGGLLTDEIRRKVWPKLLNVNANDPPPISGKNLRQMSK
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Known secondary structure (DSSP)
TTSSSS

STT
S
STT

TTS





TTTTTS
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence DYQQVLLDVRRSLRRFPPGMPEEQREGLQEELIDIILLILERNPQLHYYQGYHDIVVTFLLVVGERLATS
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Known secondary structure (DSSP) T

TTS
TTS

TT



TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LVEKLSTHHLRDFMDPTMDNTKHILNYLMPIIDQVNPELHDFMQSAEVGTIFALSWLITWFGHVLSDFRH
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Known secondary structure (DSSP) TTTGGGGSSSST
T

SGGGTTTTT


 .........220.........230.........240.........250.........260.........270.........280
Sequence VVRLYDFFLACHPLMPIYFAAVIVLYREQEVLDCDCDMASVHHLLSQIPQDLPYETLISRAGDLFVQFPP
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Known secondary structure (DSSP) S
TTTTS
SSTTS

SS

S

 .
Sequence S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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