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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4hl6D_

Fold library idPDB HeaderMoleculeTitle
c4hl6D_PDB header: transferaseChain: D: PDB Molecule: uncharacterized protein yfde;PDBTitle: yfde from escherichia coli


Added to library: Sat May 25 08:49:34 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KGPFEGLLVIDMTHVLNGPFGTQLLCNMGARVIKVEPPGHGDDTRTFGPYVDGQSLYYSFINHGKESVVL
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Known secondary structure (DSSP)

TTTT



TTTT

TTT
SGGGGSS
TTTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence DLKNDHDKSIFINMLKQADVLAENFRPGTMEKLGFSWETLQEINPRLIYASSSGFGHTGPLKDAPAYDTI
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Known secondary structure (DSSP)
TTS
S
S
TTTT


TT
SS
SSSTTTTS


 .........150.........160.........170.........180.........190.........200.........210
Sequence IQAMSGIMMETGYPDAPPVRVGTSLADLCGGVYLFSGIVSALYGREKSQRGAHVDIAMFDATLSFLEHGL
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Known secondary structure (DSSP) SSS
TTS




SS




TT
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence MAYIATGKSPQRLGNRHPYMAPFDVFNTQDKPITICCGNDKLFSALCQALELTELVNDPRFSSNILRVQN
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Known secondary structure (DSSP)






TTS
SS
SS

SSS


ST
GGGSS
TTTSST
 .........290.........300.........310.........320.........330.........340.........350
Sequence QAILKQYIERTLKTQAAEVWLARIHEVGVPVAPLLSVAEAIKLPQTQARNMLIEAGGIMMPGNPIKISGC
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Known secondary structure (DSSP) TTS
TT




TTSTT
TT

S


TTS
 .........360.........370....
Sequence ADPHVMPGAATLDQHGEQIRQEFS
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Known secondary structure (DSSP)


S




TTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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