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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4hk6D_

Fold library idPDB HeaderMoleculeTitle
c4hk6D_PDB header: lyaseChain: D: PDB Molecule: uracil-5-carboxylate decarboxylase;PDBTitle: crystal structure of cordyceps militaris idcase in complex with 5-2 nitro-uracil


Added to library: Sat Sep 14 08:25:04 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PVVVDIHTHMYPPSYIAMLEKRQTIPLVRTFPQADEPRLILLSSELAALDAALADPAAKLPGRPLSTHFA
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Known secondary structure (DSSP)




T
SSSS

TT
SS


GGG
TTS


S

GGGT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SLAQKMHFMDTNGIRVSVISLANPWFDFLAPDEAPGIADAVNAEFSDMCAQHVGRLFFFAALPLSAPVDA
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Known secondary structure (DSSP)
TT
S
TTTTTTS
TTTTTTTT

TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VKASIERVKNLKYCRGIILGTSGLGKGLDDPHLLPVFEAVADAKLLVFLHPHYGLPNEVYGPRSEEYGHV
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Known secondary structure (DSSP) TTSTT
TTBTTTBTT
GGGTT



S
S
GGGG
TTGGGGTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LPLALGFPMETTIAVARMYMAGVFDHVRNLQMLLAHSGGTLPFLAGRIESCIVHDGHLVKTGKVPKDRRT
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Known secondary structure (DSSP) TTTSTT

GGGGTTT
TT
S
TT


 .........290.........300.........310.........320.........330.........340.........350
Sequence IWTVLKEQIYLDAVIYSEVGLQAAIASSGADRLMFGTDHPFFPPIEEDVQGPWDSSRLNAQAVIKAVGEG
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Known secondary structure (DSSP) T
TTSS
GGG



BTSS

SSS
TTS


TT
 .........360.........
Sequence SSDAAAVMGLNAVRVLSLK
Predicted secondary structure


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Known secondary structure (DSSP)
TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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