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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4hj1A_

Fold library idPDB HeaderMoleculeTitle
c4hj1A_PDB header: viral proteinChain: A: PDB Molecule: envelope glycoprotein;PDBTitle: crystal structure of glycoprotein c from rift valley fever virus2 (glycosylated)


Added to library: Tue Jan 22 11:57:11 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DPGCSELIQASSRITTCSTEGVNTKCRLSGTALIRAGSVGAEACLMLKGVKEDQTKFLKIKTVSSELSCR
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Known secondary structure (DSSP)
B


GGGSSS



BTS
SSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence EGQSYWTGSFSPKCLSSRRCHLVGECHVNRCLSWRDNETSAEFSFVGESTTMRENKCFEQCGGWGCGCFN
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Known secondary structure (DSSP)


TTSTT
STTTTTT

TT


GGGGGG



B


SGGGT
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VNPSCLFVHTYLQSVRKEALRVFNCIDWVHKLTLEITDFDGSVSTIDLGASSSRFTNWGSVSLSLDAEGI
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Known secondary structure (DSSP) SS
SSS


TTS

TT
TT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence SGSNSFSFIESPGKGYAIVDEPFSEIPRQGFLGEIRCNSESSVLSAHESCLRAPNLISYKPMIDQLECTT
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Known secondary structure (DSSP) TTGGG
TTTSS


SS

TTSTTSBSSTTBTTS
TT
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence NLIDPFVVFERGSLPQTRNDKTFAASKGNRGVQAFSKGSVQADLTLMFDNFEVDFVGAAVSCDAAFLNLT
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Known secondary structure (DSSP)



TBSSTT
SSS


S




S




 .........360.........370.........380.........390.........400.........410.........420
Sequence GCYSCNAGARVCLSITSTGTGSLSAHNKDGSLHIVLPSENGTKDQCQILHFTVPEVEEEFMYSCDGDERP
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Known secondary structure (DSSP) BSSSSS
SS
TTSS

B

SSSSSS

 .........430.
Sequence LLVKGTLIAID
Predicted secondary structure
SS confidence










Known secondary structure (DSSP)
B



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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