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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4he8M_

Fold library idPDB HeaderMoleculeTitle
c4he8M_PDB header: oxidoreductaseChain: M: PDB Molecule: nadh-quinone oxidoreductase subunit 13;PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 thermus thermophilus


Added to library: Sat Feb 16 09:09:03 2013
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MVVLAVLLPVVFGALLLLGLPRALGVLGAGLSFLLNLYLFLTHPGGVAHAFQAPLLPGAGVYWAFGLDGL
Predicted secondary structure








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Known secondary structure (DSSP)
TT

STT

SSS
S
SSTTS




 .........80.........90.........100.........110.........120.........130.........140
Sequence SALFFLTIALTVFLGALVARVEGRFLGLALLMEGLLLGLFAARDLLVFYVFFEAALIPALLMLYLYGGEG
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Known secondary structure (DSSP)
S

SS
B
BTTT

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence RTRALYTFVLFTLVGSLPMLAAVLGARLLSGSPTFLLEDLLAHPLQEEAAFWVFLGFALAFAIKTPLFPL
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Known secondary structure (DSSP) TTT
SSSBS


TTTTTT
GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence HAWLPPFHQENHPSGLADALGTLYKVGVFAFFRFAIPLAPEGFAQAQGLLLFLAALSALYGAWVAFAAKD
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Known secondary structure (DSSP)
TTS
TT
T
TT
GGG

B
 .........290.........300.........310.........320.........330.........340.........350
Sequence FKTLLAYAGLSHMGVAALGVFSGTPEGAMGGLYLLAASGVYTGGLFLLAGRLYERTGTLEIGRYRGLAQS
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Known secondary structure (DSSP) T

S

BSSSS
B
BTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence APGLAALALILFLAMVGLPGLSGFPGEFLTLLGAYKASPWLAALAFLSVIASAAYALTAFQKTFWEEGGS
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Known secondary structure (DSSP) BSTTT
TTST
TTTTSSB
S
 .........430.........440.........450.........460.......
Sequence GVKDLAGAEWGFALLSVLALLLMGVFPGYFARGLHPLAEAFAKLLGG
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Known secondary structure (DSSP)






TTTTTTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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